RegulonDB RegulonDB

NagC Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
2-deoxy-D-glucose 6-phosphate 2-deoxyglucose_Ext N-monoacetylchitobiose 6-phospho-beta-D-glucosyl-(1,4)-D-glucose ChbA ChbB ChbC ChbF ChbG ChbR ChiP CreA CreB CreC CreD Crr D-fructose 6-phosphate fru_Ext chitosamine glucosamine-1P D-glucosamine-6-phosphate chitosamine_Ext D-mannose_Ext DinI Fe+2 Fe+2_Ext FeoA FeoB FeoC FimB GalP GlmS GlmU HPr L-glutamate L-glutamine ManX ManY ManZ MurP N,N'-diacetylchitobiose N,N'-diacetylchitobiose_Ext N-acetyl-D-glucosamine-6-phosphate N-acetyl-D-mannosamine-6-phosphate N-acetyl-alpha-D-glucosamine 1-phosphate alpha-Neu5Ac NAcGlc_Ext N-acetyl-beta-D-mannosamine_Ext MurNAc-6-P beta-Neu5Ac MurNAc_Ext NANA NANA_Ext N-monoacetylchitobiose-6-phosphate NagA NagB NagC NagE NanC NanM PtsG PtsH PtsI TreB UDP-GlcNAc UTP YbfN YdeN YdeP acetate ac-CoA alpha-D-mannose-6-phosphate ammonia beta-D-galactose beta-D-galactose_Ext beta-glucose beta-D-glucose-6-P beta-glucose_Ext cellobiose_Ext chbBCARFG chbBCARFG_mRNA This Gensor Unit is not yet available This Gensor Unit is not yet available CoA creABCD creABCD_mRNA dinI dinI_mRNA PP feoABC feoABC_mRNA fimB fimB_mRNA galP galP_mRNA glmUS glmUS_mRNA manXYZ manXYZ_mRNA methyl beta-D-glucoside 6-phosphate b-methyl-D-glucoside_Ext nagBAC-umpH nagBAC-umpH_mRNA nagE nagE_mRNA nanCM nanCM_mRNA ptsHI-crr ptsHI-crr_mRNA pyruvate trehalose 6-phosphate trehalose_Ext ydeN ydeN_mRNA ydeP ydeP_mRNA NagC N-acetyl-D-glucosamine-6-phosphate ChbA ChbC ChbB ManZ ManY ManX MurP Crr TreB Crr PtsG Crr pyruvate PEP_Ext D-glucosamine-6-phosphate pyruvate pyruvate N-acetyl-D-glucosamine-6-phosphate diacetylchitobiose 6-phosphate PEP_Ext pyruvate PEP_Ext PEP_Ext pyruvate PEP_Ext pyruvate acetate acetate PEP_Ext pyruvate PEP_Ext NagC


Gensor Unit       
Name: NagC
Classification:
Groups: General function prediction only
Inorganic ion transport and metabolism
Posttranslational modification, protein turnover, chaperones
Transcription
Carbohydrate transport and metabolism
Energy production and conversion
Replication, recombination and repair
Signal transduction mechanisms
Defense mechanisms
Cell wall/membrane/envelope biogenesis
Nucleotide transport and metabolism
Gene Ontology Terms (GO): biological_process GO:0015074 - DNA integration
GO:0006310 - DNA recombination
GO:0006281 - DNA repair
GO:1902815 - N,N'-diacetylchitobiose import
GO:0006046 - N-acetylglucosamine catabolic process
GO:0006044 - N-acetylglucosamine metabolic process
Read more >
cellular_component GO:0009279 - cell outer membrane
GO:0005737 - cytoplasm
GO:0005829 - cytosol
GO:0031234 - extrinsic component of cytoplasmic side of plasma membrane
GO:0045203 - integral component of cell outer membrane
GO:0016021 - integral component of membrane
GO:0005887 - integral component of plasma membrane
Read more >
molecular_function GO:0051539 - 4 iron, 4 sulfur cluster binding
GO:0008253 - 5'-nucleotidase activity
GO:0008706 - 6-phospho-beta-glucosidase activity
GO:0005524 - ATP binding
GO:0003677 - DNA binding
GO:0003700 - DNA-binding transcription factor activity
GO:0005525 - GTP binding
Read more >
Components:
  Function Name Type
  simple_molecule α,α-trehalose 6-phosphate simple_molecule
  simple_molecule α-D-glucosamine phosphate simple_molecule
  simple_molecule α-Neu5Ac simple_molecule
  simple_molecule 2-deoxy-D-glucose 6-phosphate simple_molecule
  simple_molecule 2-deoxyglucose_Ext simple_molecule
  simple_molecule 5'-IMP simple_molecule
  simple_molecule 5'-UMP simple_molecule
  simple_molecule 5'-ribonucleotide simple_molecule
  protein ChbA protein
  complex ChbA-ChbC-ChbB complex
  protein ChbB protein
  protein ChbC protein
  protein ChbF protein
  protein ChbG protein
  protein ChbR protein
  protein ChiP protein
  protein ChiQ protein
  protein CreA protein
  protein CreB protein
  protein CreC protein
  protein CreD protein
  protein Crr protein
  protein DinI protein
  protein EIINag protein
  simple_molecule Fe+2 simple_molecule
  simple_molecule Fe+2_Ext simple_molecule
  protein FeoA protein
  protein FeoB protein
  protein FeoC protein
  protein FimB protein
  protein GalP protein
  protein GlmS protein
  protein GlmU protein
  simple_molecule HPr - phosphorylated_Ext simple_molecule
  protein IIABMan protein
  simple_molecule L-glutamate simple_molecule
  simple_molecule ManNAc-6-P simple_molecule
  protein ManX protein
  protein ManY protein
  protein ManZ protein
  complex ManZ-ManY-ManX complex
  simple_molecule Methyl-D-glucoside_Ext simple_molecule
  protein MtlR protein
  complex MtlR-PtsH complex
  simple_molecule MurNAc-6-P simple_molecule
  simple_molecule MurNAc_Ext simple_molecule
  protein MurP protein
  complex MurP-Crr complex
  simple_molecule N-acetyl-α-D-glucosamine 1-phosphate simple_molecule
  simple_molecule N-acetyl-α-D-glucosamine 6-phosphate simple_molecule
  simple_molecule N-acetyl-D-glucosamine 6-phosphate simple_molecule
  simple_molecule N-acetyl-beta-D-mannosamine_Ext simple_molecule
  simple_molecule N-acetylneuraminate simple_molecule
  simple_molecule N-acetylneuraminate_Ext simple_molecule
  simple_molecule N-monoacetylchitobiose simple_molecule
  simple_molecule N-monoacetylchitobiose 6'-phosphate simple_molecule
  simple_molecule NAcGlc_Ext simple_molecule
  protein NagA protein
  protein NagB protein
  protein NagC protein
  complex NagC-N-acetyl-D-glucosamine 6-phosphate complex
  protein NagE protein
  protein NanC protein
  protein NanM protein
  protein NanS protein
  protein PtsG protein
  complex PtsG-Crr complex
  simple_molecule PtsH simple_molecule
  protein PtsI protein
  protein TreB protein
  complex TreB-Crr complex
  simple_molecule UDP-GlcNAc simple_molecule
  protein UmpH protein
  protein YdeM protein
  protein YdeN protein
  protein YdeP protein
  protein YjjE protein
  simple_molecule acetate simple_molecule
  simple_molecule acetyl-CoA simple_molecule
  simple_molecule ammonium simple_molecule
  simple_molecule beta-D-cellobiose-6'-p simple_molecule
  simple_molecule beta-D-cellobiose_Ext simple_molecule
  simple_molecule beta-Neu5Ac simple_molecule
  simple_molecule beta-Neu5Ac_Ext simple_molecule
  gene chbBCARFG gene
  RNA chbBCARFG_mRNA RNA
  gene chiPQ gene
  RNA chiPQ_mRNA RNA
  simple_molecule chitobiose simple_molecule
  simple_molecule chitobiose_Ext simple_molecule
  simple_molecule chitosamine simple_molecule
  simple_molecule chitosamine_Ext simple_molecule
  simple_molecule coenzyme A simple_molecule
  gene creABCD gene
  RNA creABCD_mRNA RNA
  simple_molecule cytidine simple_molecule
  simple_molecule cytidylate simple_molecule
  simple_molecule diacetylchitobiose 6-phosphate simple_molecule
  gene dinI gene
  RNA dinI_mRNA RNA
  simple_molecule diphosphate simple_molecule
  gene feoABC gene
  RNA feoABC_mRNA RNA
  gene fimB gene
  RNA fimB_mRNA RNA
  simple_molecule fructofuranose_Ext simple_molecule
  simple_molecule fructose-6-P simple_molecule
  gene galP gene
  RNA galP_mRNA RNA
  simple_molecule galactopyranose simple_molecule
  simple_molecule galactopyranose_Ext simple_molecule
  gene glmUS gene
  RNA glmUS_mRNA RNA
  simple_molecule glucopyranose simple_molecule
  simple_molecule glucopyranose_Ext simple_molecule
  simple_molecule glucosamine-1P simple_molecule
  simple_molecule glucose-6-P simple_molecule
  simple_molecule glutamine simple_molecule
  simple_molecule guanosine simple_molecule
  simple_molecule guanylate simple_molecule
  simple_molecule inosine simple_molecule
  simple_molecule keto-D-fructose 6-phosphate simple_molecule
  gene manXYZ gene
  RNA manXYZ_mRNA RNA
  simple_molecule mannopyranose-6-P simple_molecule
  simple_molecule methyl α-D-glucoside 6-phosphate simple_molecule
  gene nagBAC-umpH gene
  RNA nagBAC-umpH_mRNA RNA
  gene nagE gene
  RNA nagE_mRNA RNA
  gene nanCM gene
  gene nanCMS gene
  RNA nanCMS_mRNA RNA
  RNA nanCM_mRNA RNA
  simple_molecule nucleoside simple_molecule
  simple_molecule phosphate simple_molecule
  gene ptsHI-crr gene
  RNA ptsHI-crr_mRNA RNA
  simple_molecule seminose_Ext simple_molecule
  simple_molecule trehalose_Ext simple_molecule
  simple_molecule uridine simple_molecule
  simple_molecule uridine-triphosphate simple_molecule
  gene ydeNM gene
  RNA ydeNM_mRNA RNA
  gene ydeP gene
  RNA ydeP_mRNA RNA


Reactions       
Showing 99 reactions
NagC fimB fimB_mRNA
Name: fimB -> fimB_mRNA
Description: Transcription of transcription unit fimB. Reaction activation by NagC.
Type: transcription
Pathway Components: fimB - NagC -> fimB_mRNA
Components:
Function Name Type
activator NagC protein
reactant fimB gene
product fimB_mRNA RNA
NagC NagC glmUS glmUS_mRNA
Name: glmUS -> glmUS_mRNA
Description: Transcription of transcription unit glmUS. Reaction activation by NagC. Reaction inhibition by NagC.
Type: transcription
Pathway Components: glmUS - NagC - NagC -> glmUS_mRNA
Components:
Function Name Type
activator NagC protein
inhibitor NagC protein
reactant glmUS gene
product glmUS_mRNA RNA
NagC chbBCARFG chbBCARFG_mRNA
Name: chbBCARFG -> chbBCARFG_mRNA
Description: Transcription of transcription unit chbBCARFG. Reaction inhibition by NagC.
Type: transcription
Pathway Components: chbBCARFG - NagC -> chbBCARFG_mRNA
Components:
Function Name Type
inhibitor NagC protein
reactant chbBCARFG gene
product chbBCARFG_mRNA RNA
NagC chiPQ chiPQ_mRNA
Name: chiPQ -> chiPQ_mRNA
Description: Transcription of transcription unit chiPQ. Reaction inhibition by NagC.
Type: transcription
Pathway Components: chiPQ - NagC -> chiPQ_mRNA
Components:
Function Name Type
inhibitor NagC protein
reactant chiPQ gene
product chiPQ_mRNA RNA
NagC creABCD creABCD_mRNA
Name: creABCD -> creABCD_mRNA
Description: Transcription of transcription unit creABCD. Reaction inhibition by NagC.
Type: transcription
Pathway Components: creABCD - NagC -> creABCD_mRNA
Components:
Function Name Type
inhibitor NagC protein
reactant creABCD gene
product creABCD_mRNA RNA
NagC dinI dinI_mRNA
Name: dinI -> dinI_mRNA
Description: Transcription of transcription unit dinI. Reaction inhibition by NagC.
Type: transcription
Pathway Components: dinI - NagC -> dinI_mRNA
Components:
Function Name Type
inhibitor NagC protein
reactant dinI gene
product dinI_mRNA RNA
NagC galP galP_mRNA
Name: galP -> galP_mRNA
Description: Transcription of transcription unit galP. Reaction inhibition by NagC.
Type: transcription
Pathway Components: galP - NagC -> galP_mRNA
Components:
Function Name Type
inhibitor NagC protein
reactant galP gene
product galP_mRNA RNA
NagC manXYZ manXYZ_mRNA
Name: manXYZ -> manXYZ_mRNA
Description: Transcription of transcription unit manXYZ. Reaction inhibition by NagC.
Type: transcription
Pathway Components: manXYZ - NagC -> manXYZ_mRNA
Components:
Function Name Type
inhibitor NagC protein
reactant manXYZ gene
product manXYZ_mRNA RNA
NagC nagBAC-umpH nagBAC-umpH_mRNA
Name: nagBAC-umpH -> nagBAC-umpH_mRNA
Description: Transcription of transcription unit nagBAC-umpH. Reaction inhibition by NagC.
Type: transcription
Pathway Components: nagBAC-umpH - NagC -> nagBAC-umpH_mRNA
Components:
Function Name Type
inhibitor NagC protein
reactant nagBAC-umpH gene
product nagBAC-umpH_mRNA RNA
NagC nagE nagE_mRNA
Name: nagE -> nagE_mRNA
Description: Transcription of transcription unit nagE. Reaction inhibition by NagC.
Type: transcription
Pathway Components: nagE - NagC -> nagE_mRNA
Components:
Function Name Type
inhibitor NagC protein
reactant nagE gene
product nagE_mRNA RNA
NagC nanCM nanCM_mRNA
Name: nanCM -> nanCM_mRNA
Description: Transcription of transcription unit nanCM. Reaction inhibition by NagC.
Type: transcription
Pathway Components: nanCM - NagC -> nanCM_mRNA
Components:
Function Name Type
inhibitor NagC protein
reactant nanCM gene
product nanCM_mRNA RNA
NagC nanCMS nanCMS_mRNA
Name: nanCMS -> nanCMS_mRNA
Description: Transcription of transcription unit nanCMS. Reaction inhibition by NagC.
Type: transcription
Pathway Components: nanCMS - NagC -> nanCMS_mRNA
Components:
Function Name Type
inhibitor NagC protein
reactant nanCMS gene
product nanCMS_mRNA RNA
NagC ptsHI-crr ptsHI-crr_mRNA
Name: ptsHI-crr -> ptsHI-crr_mRNA
Description: Transcription of transcription unit ptsHI-crr. Reaction inhibition by NagC.
Type: transcription
Pathway Components: ptsHI-crr - NagC -> ptsHI-crr_mRNA
Components:
Function Name Type
inhibitor NagC protein
reactant ptsHI-crr gene
product ptsHI-crr_mRNA RNA
NagC ydeNM ydeNM_mRNA
Name: ydeNM -> ydeNM_mRNA
Description: Transcription of transcription unit ydeNM. Reaction inhibition by NagC.
Type: transcription
Pathway Components: ydeNM - NagC -> ydeNM_mRNA
Components:
Function Name Type
inhibitor NagC protein
reactant ydeNM gene
product ydeNM_mRNA RNA
NagC ydeP ydeP_mRNA
Name: ydeP -> ydeP_mRNA
Description: Transcription of transcription unit ydeP. Reaction inhibition by NagC.
Type: transcription
Pathway Components: ydeP - NagC -> ydeP_mRNA
Components:
Function Name Type
inhibitor NagC protein
reactant ydeP gene
product ydeP_mRNA RNA
feoABC feoABC_mRNA
Name: feoABC -> feoABC_mRNA
Description: Transcription of transcription unit feoABC. Reaction activation by NagC.
Type: transcription
Pathway Components: feoABC -> feoABC_mRNA
Components:
Function Name Type
reactant feoABC gene
product feoABC_mRNA RNA
N-acetyl-D-glucosamine 6-phosphate + NagC NagC-N-acetyl-D-glucosamine 6-phosphate
Name: N-acetyl-D-glucosamine 6-phosphate + NagC -> NagC-N-acetyl-D-glucosamine 6-phosphate
Description: Reaction transforming N-acetyl-D-glucosamine 6-phosphate, NagC into NagC-N-acetyl-D-glucosamine 6-phosphate
Type: state transition
Pathway Components: N-acetyl-D-glucosamine 6-phosphate + NagC -> NagC-N-acetyl-D-glucosamine 6-phosphate
Components:
Function Name Type
reactant N-acetyl-D-glucosamine 6-phosphate simple_molecule
reactant NagC protein
product NagC-N-acetyl-D-glucosamine 6-phosphate complex
chbBCARFG_mRNA ChbB
Name: chbBCARFG_mRNA -> ChbB
Description: Translation of ChbB
Type: translation
Pathway Components: chbBCARFG_mRNA -> ChbB
Components:
Function Name Type
product ChbB protein
reactant chbBCARFG_mRNA RNA
ChbA + ChbB + ChbC ChbA-ChbC-ChbB
Name: ChbA + ChbB + ChbC -> ChbA-ChbC-ChbB
Description: Reaction transforming ChbA, ChbB, ChbC into ChbA-ChbC-ChbB
Type: state transition
Pathway Components: ChbA + ChbB + ChbC -> ChbA-ChbC-ChbB
Components:
Function Name Type
reactant ChbA protein
product ChbA-ChbC-ChbB complex
reactant ChbB protein
reactant ChbC protein
ChbA-ChbC-ChbB HPr - phosphorylated_Ext + chitobiose_Ext diacetylchitobiose 6-phosphate + PtsH
Name: HPr - phosphorylated_Ext + chitobiose_Ext -> diacetylchitobiose 6-phosphate + PtsH
Description: Transport of HPr - phosphorylated_Ext, chitobiose_Ext through a bacterial membrane, leading to the presence of diacetylchitobiose 6-phosphate, PtsH inside the cell.
Type: transport
Pathway Components: HPr - phosphorylated_Ext + chitobiose_Ext - ChbA-ChbC-ChbB -> diacetylchitobiose 6-phosphate + PtsH
Components:
Function Name Type
catalyzer ChbA-ChbC-ChbB complex
reactant HPr - phosphorylated_Ext simple_molecule
product PtsH simple_molecule
reactant chitobiose_Ext simple_molecule
product diacetylchitobiose 6-phosphate simple_molecule
ChbA-ChbC-ChbB HPr - phosphorylated_Ext + beta-D-cellobiose_Ext beta-D-cellobiose-6'-p + PtsH
Name: HPr - phosphorylated_Ext + beta-D-cellobiose_Ext -> beta-D-cellobiose-6'-p + PtsH
Description: Transport of HPr - phosphorylated_Ext, beta-D-cellobiose_Ext through a bacterial membrane, leading to the presence of beta-D-cellobiose-6'-p, PtsH inside the cell.
Type: transport
Pathway Components: HPr - phosphorylated_Ext + beta-D-cellobiose_Ext - ChbA-ChbC-ChbB -> beta-D-cellobiose-6'-p + PtsH
Components:
Function Name Type
catalyzer ChbA-ChbC-ChbB complex
reactant HPr - phosphorylated_Ext simple_molecule
product PtsH simple_molecule
product beta-D-cellobiose-6'-p simple_molecule
reactant beta-D-cellobiose_Ext simple_molecule
chbBCARFG_mRNA ChbC
Name: chbBCARFG_mRNA -> ChbC
Description: Translation of ChbC
Type: translation
Pathway Components: chbBCARFG_mRNA -> ChbC
Components:
Function Name Type
product ChbC protein
reactant chbBCARFG_mRNA RNA
chbBCARFG_mRNA ChbA
Name: chbBCARFG_mRNA -> ChbA
Description: Translation of ChbA
Type: translation
Pathway Components: chbBCARFG_mRNA -> ChbA
Components:
Function Name Type
product ChbA protein
reactant chbBCARFG_mRNA RNA
chbBCARFG_mRNA ChbR
Name: chbBCARFG_mRNA -> ChbR
Description: Translation of ChbR
Type: translation
Pathway Components: chbBCARFG_mRNA -> ChbR
Components:
Function Name Type
product ChbR protein
reactant chbBCARFG_mRNA RNA
chbBCARFG_mRNA ChbF
Name: chbBCARFG_mRNA -> ChbF
Description: Translation of ChbF
Type: translation
Pathway Components: chbBCARFG_mRNA -> ChbF
Components:
Function Name Type
product ChbF protein
reactant chbBCARFG_mRNA RNA
ChbF N-monoacetylchitobiose 6'-phosphate Products
Name: N-monoacetylchitobiose 6'-phosphate -> N-acetyl-α-D-glucosamine 6-phosphate + chitosamine
Description: Reaction transforming N-monoacetylchitobiose 6'-phosphate into N-acetyl-α-D-glucosamine 6-phosphate, chitosamine
Type: state transition
Pathway Components: N-monoacetylchitobiose 6'-phosphate - ChbF -> N-acetyl-α-D-glucosamine 6-phosphate + chitosamine
Components:
Function Name Type
catalyzer ChbF protein
product N-acetyl-α-D-glucosamine 6-phosphate simple_molecule
reactant N-monoacetylchitobiose 6'-phosphate simple_molecule
product chitosamine simple_molecule
ChbF beta-D-cellobiose-6'-p glucopyranose + glucose-6-P
Name: beta-D-cellobiose-6'-p -> glucopyranose + glucose-6-P
Description: Reaction transforming beta-D-cellobiose-6'-p into glucopyranose, glucose-6-P
Type: state transition
Pathway Components: beta-D-cellobiose-6'-p - ChbF -> glucopyranose + glucose-6-P
Components:
Function Name Type
catalyzer ChbF protein
reactant beta-D-cellobiose-6'-p simple_molecule
product glucopyranose simple_molecule
product glucose-6-P simple_molecule
chbBCARFG_mRNA ChbG
Name: chbBCARFG_mRNA -> ChbG
Description: Translation of ChbG
Type: translation
Pathway Components: chbBCARFG_mRNA -> ChbG
Components:
Function Name Type
product ChbG protein
reactant chbBCARFG_mRNA RNA
ChbG diacetylchitobiose 6-phosphate Products
Name: diacetylchitobiose 6-phosphate -> N-monoacetylchitobiose 6'-phosphate + acetate
Description: Reaction transforming diacetylchitobiose 6-phosphate into N-monoacetylchitobiose 6'-phosphate, acetate
Type: state transition
Pathway Components: diacetylchitobiose 6-phosphate - ChbG -> N-monoacetylchitobiose 6'-phosphate + acetate
Components:
Function Name Type
catalyzer ChbG protein
product N-monoacetylchitobiose 6'-phosphate simple_molecule
product acetate simple_molecule
reactant diacetylchitobiose 6-phosphate simple_molecule
ChbG chitobiose N-monoacetylchitobiose + acetate
Name: chitobiose -> N-monoacetylchitobiose + acetate
Description: Reaction transforming chitobiose into N-monoacetylchitobiose, acetate
Type: state transition
Pathway Components: chitobiose - ChbG -> N-monoacetylchitobiose + acetate
Components:
Function Name Type
catalyzer ChbG protein
product N-monoacetylchitobiose simple_molecule
product acetate simple_molecule
reactant chitobiose simple_molecule
creABCD_mRNA CreA
Name: creABCD_mRNA -> CreA
Description: Translation of CreA
Type: translation
Pathway Components: creABCD_mRNA -> CreA
Components:
Function Name Type
product CreA protein
reactant creABCD_mRNA RNA
creABCD_mRNA CreB
Name: creABCD_mRNA -> CreB
Description: Translation of CreB
Type: translation
Pathway Components: creABCD_mRNA -> CreB
Components:
Function Name Type
product CreB protein
reactant creABCD_mRNA RNA
creABCD_mRNA YjjE
Name: creABCD_mRNA -> YjjE
Description: Translation of YjjE
Type: translation
Pathway Components: creABCD_mRNA -> YjjE
Components:
Function Name Type
product YjjE protein
reactant creABCD_mRNA RNA
creABCD_mRNA CreC
Name: creABCD_mRNA -> CreC
Description: Translation of CreC
Type: translation
Pathway Components: creABCD_mRNA -> CreC
Components:
Function Name Type
product CreC protein
reactant creABCD_mRNA RNA
creABCD_mRNA CreD
Name: creABCD_mRNA -> CreD
Description: Translation of CreD
Type: translation
Pathway Components: creABCD_mRNA -> CreD
Components:
Function Name Type
product CreD protein
reactant creABCD_mRNA RNA
chiPQ_mRNA ChiP
Name: chiPQ_mRNA -> ChiP
Description: Translation of ChiP
Type: translation
Pathway Components: chiPQ_mRNA -> ChiP
Components:
Function Name Type
product ChiP protein
reactant chiPQ_mRNA RNA
ChiP chitobiose_Ext chitobiose
Name: chitobiose_Ext -> chitobiose
Description: Transport of chitobiose_Ext through a bacterial membrane, leading to the presence of chitobiose inside the cell.
Type: transport
Pathway Components: chitobiose_Ext - ChiP -> chitobiose
Components:
Function Name Type
catalyzer ChiP protein
product chitobiose simple_molecule
reactant chitobiose_Ext simple_molecule
chiPQ_mRNA ChiQ
Name: chiPQ_mRNA -> ChiQ
Description: Translation of ChiQ
Type: translation
Pathway Components: chiPQ_mRNA -> ChiQ
Components:
Function Name Type
product ChiQ protein
reactant chiPQ_mRNA RNA
dinI_mRNA DinI
Name: dinI_mRNA -> DinI
Description: Translation of DinI
Type: translation
Pathway Components: dinI_mRNA -> DinI
Components:
Function Name Type
product DinI protein
reactant dinI_mRNA RNA
ydeNM_mRNA YdeN
Name: ydeNM_mRNA -> YdeN
Description: Translation of YdeN
Type: translation
Pathway Components: ydeNM_mRNA -> YdeN
Components:
Function Name Type
product YdeN protein
reactant ydeNM_mRNA RNA
ydeNM_mRNA YdeM
Name: ydeNM_mRNA -> YdeM
Description: Translation of YdeM
Type: translation
Pathway Components: ydeNM_mRNA -> YdeM
Components:
Function Name Type
product YdeM protein
reactant ydeNM_mRNA RNA
nanCM_mRNA NanC
Name: nanCM_mRNA -> NanC
Description: Translation of NanC
Type: translation
Pathway Components: nanCM_mRNA -> NanC
Components:
Function Name Type
product NanC protein
reactant nanCM_mRNA RNA
NanC N-acetylneuraminate_Ext N-acetylneuraminate
Name: N-acetylneuraminate_Ext -> N-acetylneuraminate
Description: Transport of N-acetylneuraminate_Ext through a bacterial membrane, leading to the presence of N-acetylneuraminate inside the cell.
Type: transport
Pathway Components: N-acetylneuraminate_Ext - NanC -> N-acetylneuraminate
Components:
Function Name Type
product N-acetylneuraminate simple_molecule
reactant N-acetylneuraminate_Ext simple_molecule
catalyzer NanC protein
NanC beta-Neu5Ac_Ext beta-Neu5Ac
Name: beta-Neu5Ac_Ext -> beta-Neu5Ac
Description: Transport of beta-Neu5Ac_Ext through a bacterial membrane, leading to the presence of beta-Neu5Ac inside the cell.
Type: transport
Pathway Components: beta-Neu5Ac_Ext - NanC -> beta-Neu5Ac
Components:
Function Name Type
catalyzer NanC protein
product beta-Neu5Ac simple_molecule
reactant beta-Neu5Ac_Ext simple_molecule
nanCM_mRNA NanM
Name: nanCM_mRNA -> NanM
Description: Translation of NanM
Type: translation
Pathway Components: nanCM_mRNA -> NanM
Components:
Function Name Type
product NanM protein
reactant nanCM_mRNA RNA
NanM α-Neu5Ac beta-Neu5Ac
Name: α-Neu5Ac -> beta-Neu5Ac
Description: Reaction transforming α-Neu5Ac into beta-Neu5Ac
Type: state transition
Pathway Components: α-Neu5Ac - NanM -> beta-Neu5Ac
Components:
Function Name Type
reactant α-Neu5Ac simple_molecule
catalyzer NanM protein
product beta-Neu5Ac simple_molecule
nagBAC-umpH_mRNA NagB
Name: nagBAC-umpH_mRNA -> NagB
Description: Translation of NagB
Type: translation
Pathway Components: nagBAC-umpH_mRNA -> NagB
Components:
Function Name Type
product NagB protein
reactant nagBAC-umpH_mRNA RNA
N-acetyl-α-D-glucosamine 6-phosphate NagB PtsH α-D-glucosamine phosphate fructose-6-P + ammonium
Name: α-D-glucosamine phosphate -> fructose-6-P + ammonium
Description: Reaction transforming α-D-glucosamine phosphate into fructose-6-P, ammonium
Type: state transition
Pathway Components: α-D-glucosamine phosphate - NagB - N-acetyl-α-D-glucosamine 6-phosphate - PtsH -> fructose-6-P + ammonium
Components:
Function Name Type
reactant α-D-glucosamine phosphate simple_molecule
inhibitor N-acetyl-α-D-glucosamine 6-phosphate simple_molecule
catalyzer NagB protein
inhibitor PtsH simple_molecule
product ammonium simple_molecule
product fructose-6-P simple_molecule
nagBAC-umpH_mRNA NagA
Name: nagBAC-umpH_mRNA -> NagA
Description: Translation of NagA
Type: translation
Pathway Components: nagBAC-umpH_mRNA -> NagA
Components:
Function Name Type
product NagA protein
reactant nagBAC-umpH_mRNA RNA
α-D-glucosamine phosphate NagA acetate fructose-6-P N-acetyl-α-D-glucosamine 6-phosphate α-D-glucosamine phosphate + acetate
Name: N-acetyl-α-D-glucosamine 6-phosphate -> α-D-glucosamine phosphate + acetate
Description: Reaction transforming N-acetyl-α-D-glucosamine 6-phosphate into α-D-glucosamine phosphate, acetate
Type: state transition
Pathway Components: N-acetyl-α-D-glucosamine 6-phosphate - NagA - acetate - α-D-glucosamine phosphate - fructose-6-P -> α-D-glucosamine phosphate + acetate
Components:
Function Name Type
inhibitor α-D-glucosamine phosphate simple_molecule
product α-D-glucosamine phosphate simple_molecule
reactant N-acetyl-α-D-glucosamine 6-phosphate simple_molecule
catalyzer NagA protein
inhibitor acetate simple_molecule
product acetate simple_molecule
inhibitor fructose-6-P simple_molecule
nagBAC-umpH_mRNA NagC
Name: nagBAC-umpH_mRNA -> NagC
Description: Translation of NagC
Type: translation
Pathway Components: nagBAC-umpH_mRNA -> NagC
Components:
Function Name Type
product NagC protein
reactant nagBAC-umpH_mRNA RNA
nagBAC-umpH_mRNA UmpH
Name: nagBAC-umpH_mRNA -> UmpH
Description: Translation of UmpH
Type: translation
Pathway Components: nagBAC-umpH_mRNA -> UmpH
Components:
Function Name Type
product UmpH protein
reactant nagBAC-umpH_mRNA RNA
UmpH 5'-ribonucleotide nucleoside + phosphate
Name: 5'-ribonucleotide -> nucleoside + phosphate
Description: Reaction transforming 5'-ribonucleotide into nucleoside, phosphate
Type: state transition
Pathway Components: 5'-ribonucleotide - UmpH -> nucleoside + phosphate
Components:
Function Name Type
reactant 5'-ribonucleotide simple_molecule
catalyzer UmpH protein
product nucleoside simple_molecule
product phosphate simple_molecule
UmpH 5'-IMP phosphate + inosine
Name: 5'-IMP -> phosphate + inosine
Description: Reaction transforming 5'-IMP into phosphate, inosine
Type: state transition
Pathway Components: 5'-IMP - UmpH -> phosphate + inosine
Components:
Function Name Type
reactant 5'-IMP simple_molecule
catalyzer UmpH protein
product inosine simple_molecule
product phosphate simple_molecule
UmpH 5'-UMP phosphate + uridine
Name: 5'-UMP -> phosphate + uridine
Description: Reaction transforming 5'-UMP into phosphate, uridine
Type: state transition
Pathway Components: 5'-UMP - UmpH -> phosphate + uridine
Components:
Function Name Type
reactant 5'-UMP simple_molecule
catalyzer UmpH protein
product phosphate simple_molecule
product uridine simple_molecule
UmpH cytidylate phosphate + cytidine
Name: cytidylate -> phosphate + cytidine
Description: Reaction transforming cytidylate into phosphate, cytidine
Type: state transition
Pathway Components: cytidylate - UmpH -> phosphate + cytidine
Components:
Function Name Type
catalyzer UmpH protein
product cytidine simple_molecule
reactant cytidylate simple_molecule
product phosphate simple_molecule
UmpH guanylate guanosine + phosphate
Name: guanylate -> guanosine + phosphate
Description: Reaction transforming guanylate into guanosine, phosphate
Type: state transition
Pathway Components: guanylate - UmpH -> guanosine + phosphate
Components:
Function Name Type
catalyzer UmpH protein
product guanosine simple_molecule
reactant guanylate simple_molecule
product phosphate simple_molecule
nanCMS_mRNA NanC
Name: nanCMS_mRNA -> NanC
Description: Translation of NanC
Type: translation
Pathway Components: nanCMS_mRNA -> NanC
Components:
Function