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MlrA Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
RplJ RplY RplM RpmD RplN RplQ RpmJ RpmI RplK RplQ RpmC csgDEFG_mRNA RplW RpmF RplI RpmE RpmF csgDEFG RpmB RplD RplT RplX rplU-rpmA_mRNA RplC GrxD RpmI RplR RplX rplU-rpmA-yhbE-obgE_mRNA RplL CsgF RplP CsgG ObgE IbaG RplE CsgG RplM RplK CsgE RplC RplB RplB RplO RpmH RplE RplJ RplI CsgA ibaG_mRNA RplP RplU RplU RplF RpmD RplS RplS RplA RplF CadC GrxD cadC_mRNA RpmA ibaG RplO RplV IbaG rplU-rpmA-yhbE-obgE RpmE RpmH RplN RplT RplD RpmJ RpmB RplV RplL YhbE MlrA RplW CsgD RplY RpmA RplR RpmG RpmG cadC rplU-rpmA CsgE RplA RpmC CsgA_Ext


Gensor Unit       
Name: MlrA
Classification:
Groups: Transcription
Signal transduction mechanisms
Cell wall/membrane/envelope biogenesis
Translation, ribosomal structure and biogenesis
Gene Ontology Terms (GO): biological_process GO:1902626 - assembly of large subunit precursor of preribosome
GO:0022610 - biological adhesion
GO:0007059 - chromosome segregation
GO:0022611 - dormancy process
GO:0042256 - mature ribosome assembly
GO:0090071 - negative regulation of ribosome biogenesis
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cellular_component GO:0009279 - cell outer membrane
GO:0005737 - cytoplasm
GO:0005829 - cytosol
GO:0022625 - cytosolic large ribosomal subunit
GO:0016021 - integral component of membrane
GO:0005622 - intracellular anatomical structure
GO:0031246 - intrinsic component of periplasmic side of cell outer membrane
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molecular_function GO:0051537 - 2 iron, 2 sulfur cluster binding
GO:0003677 - DNA binding
GO:0001216 - DNA-binding transcription activator activity
GO:0001217 - DNA-binding transcription repressor activity
GO:0019003 - GDP binding
GO:0005525 - GTP binding
GO:0003924 - GTPase activity
Read more >
Components:
  Function Name Type
  protein CadC protein
  simple_molecule CsgA simple_molecule
  simple_molecule CsgA_Ext simple_molecule
  protein CsgD protein
  protein CsgE protein
  complex CsgE-CsgG complex
  protein CsgF protein
  protein CsgG protein
  protein GrxD protein
  protein IbaG protein
  complex IbaG-GrxD complex
  protein MlrA protein
  protein ObgE protein
  protein RplA protein
  complex RplA-RplB-RplC-RplD-RplE-RplF-RplL-RplJ-RplI-RplK-RplM-RplN-RplO-RplP-RplQ-RplR-RplS-RplT-RplU-RplV-RplW-RplX-RplY-RpmA-RpmB-RpmC-RpmD-RpmE-RpmF-RpmG-RpmH-RpmI-RpmJ complex
  protein RplB protein
  protein RplC protein
  protein RplD protein
  protein RplE protein
  protein RplF protein
  protein RplI protein
  protein RplJ protein
  protein RplK protein
  protein RplL protein
  protein RplM protein
  protein RplN protein
  protein RplO protein
  protein RplP protein
  protein RplQ protein
  protein RplR protein
  protein RplS protein
  protein RplT protein
  protein RplU protein
  protein RplV protein
  protein RplW protein
  protein RplX protein
  protein RplY protein
  protein RpmA protein
  protein RpmB protein
  protein RpmC protein
  protein RpmD protein
  protein RpmE protein
  protein RpmF protein
  protein RpmG protein
  protein RpmH protein
  protein RpmI protein
  protein RpmJ protein
  protein YhbE protein
  gene cadC gene
  RNA cadC_mRNA RNA
  gene csgDEFG gene
  RNA csgDEFG_mRNA RNA
  gene ibaG gene
  RNA ibaG_mRNA RNA
  gene rplU-rpmA gene
  gene rplU-rpmA-yhbE-obgE gene
  RNA rplU-rpmA-yhbE-obgE_mRNA RNA
  RNA rplU-rpmA_mRNA RNA


Reactions       
Showing 21 reactions
MlrA cadC cadC_mRNA
Name: cadC -> cadC_mRNA
Description: Transcription of transcription unit cadC. Reaction activation by MlrA.
Type: transcription
Pathway Components: cadC - MlrA -> cadC_mRNA
Components:
Function Name Type
activator MlrA protein
reactant cadC gene
product cadC_mRNA RNA
MlrA csgDEFG csgDEFG_mRNA
Name: csgDEFG -> csgDEFG_mRNA
Description: Transcription of transcription unit csgDEFG. Reaction activation by MlrA.
Type: transcription
Pathway Components: csgDEFG - MlrA -> csgDEFG_mRNA
Components:
Function Name Type
activator MlrA protein
reactant csgDEFG gene
product csgDEFG_mRNA RNA
MlrA ibaG ibaG_mRNA
Name: ibaG -> ibaG_mRNA
Description: Transcription of transcription unit ibaG. Reaction activation by MlrA.
Type: transcription
Pathway Components: ibaG - MlrA -> ibaG_mRNA
Components:
Function Name Type
activator MlrA protein
reactant ibaG gene
product ibaG_mRNA RNA
MlrA rplU-rpmA rplU-rpmA_mRNA
Name: rplU-rpmA -> rplU-rpmA_mRNA
Description: Transcription of transcription unit rplU-rpmA. Reaction activation by MlrA.
Type: transcription
Pathway Components: rplU-rpmA - MlrA -> rplU-rpmA_mRNA
Components:
Function Name Type
activator MlrA protein
reactant rplU-rpmA gene
product rplU-rpmA_mRNA RNA
MlrA rplU-rpmA-yhbE-obgE rplU-rpmA-yhbE-obgE_mRNA
Name: rplU-rpmA-yhbE-obgE -> rplU-rpmA-yhbE-obgE_mRNA
Description: Transcription of transcription unit rplU-rpmA-yhbE-obgE. Reaction activation by MlrA.
Type: transcription
Pathway Components: rplU-rpmA-yhbE-obgE - MlrA -> rplU-rpmA-yhbE-obgE_mRNA
Components:
Function Name Type
activator MlrA protein
reactant rplU-rpmA-yhbE-obgE gene
product rplU-rpmA-yhbE-obgE_mRNA RNA
csgDEFG_mRNA CsgD
Name: csgDEFG_mRNA -> CsgD
Description: Translation of CsgD
Type: translation
Pathway Components: csgDEFG_mRNA -> CsgD
Components:
Function Name Type
product CsgD protein
reactant csgDEFG_mRNA RNA
csgDEFG_mRNA CsgE
Name: csgDEFG_mRNA -> CsgE
Description: Translation of CsgE
Type: translation
Pathway Components: csgDEFG_mRNA -> CsgE
Components:
Function Name Type
product CsgE protein
reactant csgDEFG_mRNA RNA
CsgG + CsgE CsgE-CsgG
Name: CsgG + CsgE -> CsgE-CsgG
Description: Reaction transforming CsgG, CsgE into CsgE-CsgG
Type: state transition
Pathway Components: CsgG + CsgE -> CsgE-CsgG
Components:
Function Name Type
reactant CsgE protein
product CsgE-CsgG complex
reactant CsgG protein
CsgE-CsgG CsgA_Ext CsgA
Name: CsgA_Ext -> CsgA
Description: Transport of CsgA_Ext through a bacterial membrane, leading to the presence of CsgA inside the cell.
Type: transport
Pathway Components: CsgA_Ext - CsgE-CsgG -> CsgA
Components:
Function Name Type
product CsgA simple_molecule
reactant CsgA_Ext simple_molecule
catalyzer CsgE-CsgG complex
csgDEFG_mRNA CsgF
Name: csgDEFG_mRNA -> CsgF
Description: Translation of CsgF
Type: translation
Pathway Components: csgDEFG_mRNA -> CsgF
Components:
Function Name Type
product CsgF protein
reactant csgDEFG_mRNA RNA
csgDEFG_mRNA CsgG
Name: csgDEFG_mRNA -> CsgG
Description: Translation of CsgG
Type: translation
Pathway Components: csgDEFG_mRNA -> CsgG
Components:
Function Name Type
product CsgG protein
reactant csgDEFG_mRNA RNA
rplU-rpmA-yhbE-obgE_mRNA RplU
Name: rplU-rpmA-yhbE-obgE_mRNA -> RplU
Description: Translation of RplU
Type: translation
Pathway Components: rplU-rpmA-yhbE-obgE_mRNA -> RplU
Components:
Function Name Type
product RplU protein
reactant rplU-rpmA-yhbE-obgE_mRNA RNA
Protein Monomers Protein complex
Name: RplW + RplD + RpmD + RpmA + RplB + RpmG + RpmI + RpmJ + RplQ + RplJ + RplM + RplS + RplY + RpmC + RplT + RplN + RplX + RpmB + RplI + RpmF + RplK + RplF + RplR + RpmH + RplV + RplC + RplU + RplA + RplP + RplO + RplL + RpmE + RplE -> RplA-RplB-RplC-RplD-RplE-RplF-RplL-RplJ-RplI-RplK-RplM-RplN-RplO-RplP-RplQ-RplR-RplS-RplT-RplU-RplV-RplW-RplX-RplY-RpmA-RpmB-RpmC-RpmD-RpmE-RpmF-RpmG-RpmH-RpmI-RpmJ
Description: Reaction transforming RplW, RplD, RpmD, RpmA, RplB, RpmG, RpmI, RpmJ, RplQ, RplJ, RplM, RplS, RplY, RpmC, RplT, RplN, RplX, RpmB, RplI, RpmF, RplK, RplF, RplR, RpmH, RplV, RplC, RplU, RplA, RplP, RplO, RplL, RpmE, RplE into RplA-RplB-RplC-RplD-RplE-RplF-RplL-RplJ-RplI-RplK-RplM-RplN-RplO-RplP-RplQ-RplR-RplS-RplT-RplU-RplV-RplW-RplX-RplY-RpmA-RpmB-RpmC-RpmD-RpmE-RpmF-RpmG-RpmH-RpmI-RpmJ
Type: state transition
Pathway Components: RplW + RplD + RpmD + RpmA + RplB + RpmG + RpmI + RpmJ + RplQ + RplJ + RplM + RplS + RplY + RpmC + RplT + RplN + RplX + RpmB + RplI + RpmF + RplK + RplF + RplR + RpmH + RplV + RplC + RplU + RplA + RplP + RplO + RplL + RpmE + RplE -> RplA-RplB-RplC-RplD-RplE-RplF-RplL-RplJ-RplI-RplK-RplM-RplN-RplO-RplP-RplQ-RplR-RplS-RplT-RplU-RplV-RplW-RplX-RplY-RpmA-RpmB-RpmC-RpmD-RpmE-RpmF-RpmG-RpmH-RpmI-RpmJ
Components: Show/Hide Components Table
rplU-rpmA-yhbE-obgE_mRNA RpmA
Name: rplU-rpmA-yhbE-obgE_mRNA -> RpmA
Description: Translation of RpmA
Type: translation
Pathway Components: rplU-rpmA-yhbE-obgE_mRNA -> RpmA
Components:
Function Name Type
product RpmA protein
reactant rplU-rpmA-yhbE-obgE_mRNA RNA
rplU-rpmA-yhbE-obgE_mRNA YhbE
Name: rplU-rpmA-yhbE-obgE_mRNA -> YhbE
Description: Translation of YhbE
Type: translation
Pathway Components: rplU-rpmA-yhbE-obgE_mRNA -> YhbE
Components:
Function Name Type
product YhbE protein
reactant rplU-rpmA-yhbE-obgE_mRNA RNA
rplU-rpmA-yhbE-obgE_mRNA ObgE
Name: rplU-rpmA-yhbE-obgE_mRNA -> ObgE
Description: Translation of ObgE
Type: translation
Pathway Components: rplU-rpmA-yhbE-obgE_mRNA -> ObgE
Components:
Function Name Type
product ObgE protein
reactant rplU-rpmA-yhbE-obgE_mRNA RNA
cadC_mRNA CadC
Name: cadC_mRNA -> CadC
Description: Translation of CadC
Type: translation
Pathway Components: cadC_mRNA -> CadC
Components:
Function Name Type
product CadC protein
reactant cadC_mRNA RNA
ibaG_mRNA IbaG
Name: ibaG_mRNA -> IbaG
Description: Translation of IbaG
Type: translation
Pathway Components: ibaG_mRNA -> IbaG
Components:
Function Name Type
product IbaG protein
reactant ibaG_mRNA RNA
GrxD + IbaG IbaG-GrxD
Name: GrxD + IbaG -> IbaG-GrxD
Description: Reaction transforming GrxD, IbaG into IbaG-GrxD
Type: state transition
Pathway Components: GrxD + IbaG -> IbaG-GrxD
Components:
Function Name Type
reactant GrxD protein
reactant IbaG protein
product IbaG-GrxD complex
rplU-rpmA_mRNA RplU
Name: rplU-rpmA_mRNA -> RplU
Description: Translation of RplU
Type: translation
Pathway Components: rplU-rpmA_mRNA -> RplU
Components:
Function Name Type
product RplU protein
reactant rplU-rpmA_mRNA RNA
rplU-rpmA_mRNA RpmA
Name: rplU-rpmA_mRNA -> RpmA
Description: Translation of RpmA
Type: translation
Pathway Components: rplU-rpmA_mRNA -> RpmA
Components:
Function Name Type
product RpmA protein
reactant rplU-rpmA_mRNA RNA



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