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MatA Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
FliQ FliF FliR MotB lanthionine lanthionine_Ext EcpR FlgH FliI FlgB RpoA FliO FlgL FlhB FlhC djenkolate_Ext FlhC FliD RpoB FliD FlgH FlgF FliP FlgB FlgE FlgI RpoC FlhA ecpR_mRNA djenkolate TcyL RpoB FliE fliAZ-tcyJ_mRNA flhDC_mRNA M-DAP EcpA MotB FlgC FliG FlgK FlhA FliL FliQ TcyN fliC_mRNA L,L-homocystine_Ext FlhD FliH FlgG FliN MatA ecpA_mRNA FlgG FlhB ecpR FliL FlhD FliC MotA FlgF FliP FliJ RpoC FliN FlgC ecpA FliE FlgE FlgI flhDC fliAZ-tcyJ FliI fliC cysteine FliF FliZ TcyJ cystine_Ext FliO FliH FlgK FliA M-DAP_Ext TcyJ TcyN cysteine_Ext FliR FliC MotA FlgL FliJ FliA RpoA FliM L,L-homocystine FliM TcyL FliG cystine


Gensor Unit       
Name: MatA
Classification:
Groups: Cell motility
Transcription
Amino acid transport and metabolism
Gene Ontology Terms (GO): biological_process GO:0015074 - DNA integration
GO:0006352 - DNA-templated transcription, initiation
GO:0015811 - L-cystine transport
GO:0006865 - amino acid transport
GO:0044780 - bacterial-type flagellum assembly
GO:0044781 - bacterial-type flagellum organization
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cellular_component GO:0009288 - bacterial-type flagellum
GO:0009420 - bacterial-type flagellum filament
GO:0005737 - cytoplasm
GO:0005829 - cytosol
GO:0005576 - extracellular region
GO:0016020 - membrane
GO:0030288 - outer membrane-bounded periplasmic space
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molecular_function GO:0003677 - DNA binding
GO:0003700 - DNA-binding transcription factor activity
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity
GO:0015184 - L-cystine transmembrane transporter activity
GO:0016597 - amino acid binding
GO:0033229 - cysteine transmembrane transporter activity
GO:0046872 - metal ion binding
Read more >
Components:
  Function Name Type
  protein EcpA protein
  protein EcpR protein
  protein FlgB protein
  protein FlgC protein
  protein FlgE protein
  protein FlgF protein
  protein FlgG protein
  protein FlgH protein
  protein FlgI protein
  protein FlgK protein
  protein FlgL protein
  protein FlhA protein
  protein FlhB protein
  protein FlhC protein
  protein FlhD protein
  complex FlhD-FlhC complex
  protein FliA protein
  complex FliA-RpoB-RpoC-RpoA complex
  protein FliC protein
  protein FliD protein
  protein FliE protein
  protein FliF protein
  protein FliG protein
  protein FliH protein
  protein FliI protein
  protein FliJ protein
  protein FliL protein
  complex FliL-FliE-FliF-FlgI-FlgG-FlgF-FlgC-FlgB-MotB-MotA-FlgH-FliG-FliM-FliN-FliJ-FliI-FliH-FliR-FliQ-FliP-FliO-FlhB-FlhA-FlgE-FlgK-FlgL-FliC-FliD complex
  protein FliM protein
  protein FliN protein
  protein FliO protein
  protein FliP protein
  protein FliQ protein
  protein FliR protein
  protein FliZ protein
  simple_molecule L,L-homocystine simple_molecule
  simple_molecule L,L-homocystine_Ext simple_molecule
  simple_molecule M-DAP simple_molecule
  simple_molecule M-DAP_Ext simple_molecule
  protein MatA protein
  protein MotA protein
  protein MotB protein
  protein RpoA protein
  protein RpoB protein
  protein RpoC protein
  protein TcyJ protein
  protein TcyL protein
  protein TcyN protein
  complex TcyN-TcyL-TcyJ complex
  simple_molecule cysteine simple_molecule
  simple_molecule cysteine_Ext simple_molecule
  simple_molecule cystine simple_molecule
  simple_molecule cystine_Ext simple_molecule
  simple_molecule djenkolate simple_molecule
  simple_molecule djenkolate_Ext simple_molecule
  gene ecpA gene
  RNA ecpA_mRNA RNA
  gene ecpR gene
  RNA ecpR_mRNA RNA
  gene flhDC gene
  RNA flhDC_mRNA RNA
  gene fliAZ-tcyJ gene
  RNA fliAZ-tcyJ_mRNA RNA
  gene fliC gene
  RNA fliC_mRNA RNA
  simple_molecule lanthionine simple_molecule
  simple_molecule lanthionine_Ext simple_molecule


Reactions       
Showing 23 reactions
MatA ecpA ecpA_mRNA
Name: ecpA -> ecpA_mRNA
Description: Transcription of transcription unit ecpA. Reaction activation by MatA.
Type: transcription
Pathway Components: ecpA - MatA -> ecpA_mRNA
Components:
Function Name Type
activator MatA protein
reactant ecpA gene
product ecpA_mRNA RNA
MatA ecpR ecpR_mRNA
Name: ecpR -> ecpR_mRNA
Description: Transcription of transcription unit ecpR. Reaction activation by MatA.
Type: transcription
Pathway Components: ecpR - MatA -> ecpR_mRNA
Components:
Function Name Type
activator MatA protein
reactant ecpR gene
product ecpR_mRNA RNA
MatA flhDC flhDC_mRNA
Name: flhDC -> flhDC_mRNA
Description: Transcription of transcription unit flhDC. Reaction inhibition by MatA.
Type: transcription
Pathway Components: flhDC - MatA -> flhDC_mRNA
Components:
Function Name Type
inhibitor MatA protein
reactant flhDC gene
product flhDC_mRNA RNA
MatA fliAZ-tcyJ fliAZ-tcyJ_mRNA
Name: fliAZ-tcyJ -> fliAZ-tcyJ_mRNA
Description: Transcription of transcription unit fliAZ-tcyJ. Reaction inhibition by MatA.
Type: transcription
Pathway Components: fliAZ-tcyJ - MatA -> fliAZ-tcyJ_mRNA
Components:
Function Name Type
inhibitor MatA protein
reactant fliAZ-tcyJ gene
product fliAZ-tcyJ_mRNA RNA
MatA fliC fliC_mRNA
Name: fliC -> fliC_mRNA
Description: Transcription of transcription unit fliC. Reaction inhibition by MatA.
Type: transcription
Pathway Components: fliC - MatA -> fliC_mRNA
Components:
Function Name Type
inhibitor MatA protein
reactant fliC gene
product fliC_mRNA RNA
ecpR_mRNA EcpR
Name: ecpR_mRNA -> EcpR
Description: Translation of EcpR
Type: translation
Pathway Components: ecpR_mRNA -> EcpR
Components:
Function Name Type
product EcpR protein
reactant ecpR_mRNA RNA
fliAZ-tcyJ_mRNA FliA
Name: fliAZ-tcyJ_mRNA -> FliA
Description: Translation of FliA
Type: translation
Pathway Components: fliAZ-tcyJ_mRNA -> FliA
Components:
Function Name Type
product FliA protein
reactant fliAZ-tcyJ_mRNA RNA
RpoB + FliA + RpoA + RpoC FliA-RpoB-RpoC-RpoA
Name: RpoB + FliA + RpoA + RpoC -> FliA-RpoB-RpoC-RpoA
Description: Reaction transforming RpoB, FliA, RpoA, RpoC into FliA-RpoB-RpoC-RpoA
Type: state transition
Pathway Components: RpoB + FliA + RpoA + RpoC -> FliA-RpoB-RpoC-RpoA
Components:
Function Name Type
reactant FliA protein
product FliA-RpoB-RpoC-RpoA complex
reactant RpoA protein
reactant RpoB protein
reactant RpoC protein
fliAZ-tcyJ_mRNA FliZ
Name: fliAZ-tcyJ_mRNA -> FliZ
Description: Translation of FliZ
Type: translation
Pathway Components: fliAZ-tcyJ_mRNA -> FliZ
Components:
Function Name Type
product FliZ protein
reactant fliAZ-tcyJ_mRNA RNA
fliAZ-tcyJ_mRNA TcyJ
Name: fliAZ-tcyJ_mRNA -> TcyJ
Description: Translation of TcyJ
Type: translation
Pathway Components: fliAZ-tcyJ_mRNA -> TcyJ
Components:
Function Name Type
product TcyJ protein
reactant fliAZ-tcyJ_mRNA RNA
TcyL + TcyN + TcyJ TcyN-TcyL-TcyJ
Name: TcyL + TcyN + TcyJ -> TcyN-TcyL-TcyJ
Description: Reaction transforming TcyL, TcyN, TcyJ into TcyN-TcyL-TcyJ
Type: state transition
Pathway Components: TcyL + TcyN + TcyJ -> TcyN-TcyL-TcyJ
Components:
Function Name Type
reactant TcyJ protein
reactant TcyL protein
reactant TcyN protein
product TcyN-TcyL-TcyJ complex
M-DAP TcyN-TcyL-TcyJ cysteine cystine_Ext cystine
Name: cystine_Ext -> cystine
Description: Transport of cystine_Ext through a bacterial membrane, leading to the presence of cystine inside the cell.
Type: transport
Pathway Components: cystine_Ext - TcyN-TcyL-TcyJ - M-DAP - cysteine -> cystine
Components:
Function Name Type
inhibitor M-DAP simple_molecule
catalyzer TcyN-TcyL-TcyJ complex
inhibitor cysteine simple_molecule
product cystine simple_molecule
reactant cystine_Ext simple_molecule
TcyN-TcyL-TcyJ cysteine_Ext cysteine
Name: cysteine_Ext -> cysteine
Description: Transport of cysteine_Ext through a bacterial membrane, leading to the presence of cysteine inside the cell.
Type: transport
Pathway Components: cysteine_Ext - TcyN-TcyL-TcyJ -> cysteine
Components:
Function Name Type
catalyzer TcyN-TcyL-TcyJ complex
product cysteine simple_molecule
reactant cysteine_Ext simple_molecule
TcyN-TcyL-TcyJ M-DAP_Ext M-DAP
Name: M-DAP_Ext -> M-DAP
Description: Transport of M-DAP_Ext through a bacterial membrane, leading to the presence of M-DAP inside the cell.
Type: transport
Pathway Components: M-DAP_Ext - TcyN-TcyL-TcyJ -> M-DAP
Components:
Function Name Type
product M-DAP simple_molecule
reactant M-DAP_Ext simple_molecule
catalyzer TcyN-TcyL-TcyJ complex
TcyN-TcyL-TcyJ djenkolate_Ext djenkolate
Name: djenkolate_Ext -> djenkolate
Description: Transport of djenkolate_Ext through a bacterial membrane, leading to the presence of djenkolate inside the cell.
Type: transport
Pathway Components: djenkolate_Ext - TcyN-TcyL-TcyJ -> djenkolate
Components:
Function Name Type
catalyzer TcyN-TcyL-TcyJ complex
product djenkolate simple_molecule
reactant djenkolate_Ext simple_molecule
TcyN-TcyL-TcyJ lanthionine_Ext lanthionine
Name: lanthionine_Ext -> lanthionine
Description: Transport of lanthionine_Ext through a bacterial membrane, leading to the presence of lanthionine inside the cell.
Type: transport
Pathway Components: lanthionine_Ext - TcyN-TcyL-TcyJ -> lanthionine
Components:
Function Name Type
catalyzer TcyN-TcyL-TcyJ complex
product lanthionine simple_molecule
reactant lanthionine_Ext simple_molecule
TcyN-TcyL-TcyJ L,L-homocystine_Ext L,L-homocystine
Name: L,L-homocystine_Ext -> L,L-homocystine
Description: Transport of L,L-homocystine_Ext through a bacterial membrane, leading to the presence of L,L-homocystine inside the cell.
Type: transport
Pathway Components: L,L-homocystine_Ext - TcyN-TcyL-TcyJ -> L,L-homocystine
Components:
Function Name Type
product L,L-homocystine simple_molecule
reactant L,L-homocystine_Ext simple_molecule
catalyzer TcyN-TcyL-TcyJ complex
fliC_mRNA FliC
Name: fliC_mRNA -> FliC
Description: Translation of FliC
Type: translation
Pathway Components: fliC_mRNA -> FliC
Components:
Function Name Type
product FliC protein
reactant fliC_mRNA RNA
Protein Monomers Protein complex
Name: FliC + FlhB + FliJ + FliG + FlgI + FliN + FlgG + FliP + FlhA + FliR + FlgK + FliL + FliO + FliE + FliI + FliH + FliM + FlgH + FliD + FlgF + MotA + FlgL + FlgC + MotB + FlgB + FlgE + FliQ + FliF -> FliL-FliE-FliF-FlgI-FlgG-FlgF-FlgC-FlgB-MotB-MotA-FlgH-FliG-FliM-FliN-FliJ-FliI-FliH-FliR-FliQ-FliP-FliO-FlhB-FlhA-FlgE-FlgK-FlgL-FliC-FliD
Description: Reaction transforming FliC, FlhB, FliJ, FliG, FlgI, FliN, FlgG, FliP, FlhA, FliR, FlgK, FliL, FliO, FliE, FliI, FliH, FliM, FlgH, FliD, FlgF, MotA, FlgL, FlgC, MotB, FlgB, FlgE, FliQ, FliF into FliL-FliE-FliF-FlgI-FlgG-FlgF-FlgC-FlgB-MotB-MotA-FlgH-FliG-FliM-FliN-FliJ-FliI-FliH-FliR-FliQ-FliP-FliO-FlhB-FlhA-FlgE-FlgK-FlgL-FliC-FliD
Type: state transition
Pathway Components: FliC + FlhB + FliJ + FliG + FlgI + FliN + FlgG + FliP + FlhA + FliR + FlgK + FliL + FliO + FliE + FliI + FliH + FliM + FlgH + FliD + FlgF + MotA + FlgL + FlgC + MotB + FlgB + FlgE + FliQ + FliF -> FliL-FliE-FliF-FlgI-FlgG-FlgF-FlgC-FlgB-MotB-MotA-FlgH-FliG-FliM-FliN-FliJ-FliI-FliH-FliR-FliQ-FliP-FliO-FlhB-FlhA-FlgE-FlgK-FlgL-FliC-FliD
Components: Show/Hide Components Table
flhDC_mRNA FlhD
Name: flhDC_mRNA -> FlhD
Description: Translation of FlhD
Type: translation
Pathway Components: flhDC_mRNA -> FlhD
Components:
Function Name Type
product FlhD protein
reactant flhDC_mRNA RNA
FlhC + FlhD FlhD-FlhC
Name: FlhC + FlhD -> FlhD-FlhC
Description: Reaction transforming FlhC, FlhD into FlhD-FlhC
Type: state transition
Pathway Components: FlhC + FlhD -> FlhD-FlhC
Components:
Function Name Type
reactant FlhC protein
reactant FlhD protein
product FlhD-FlhC complex
flhDC_mRNA FlhC
Name: flhDC_mRNA -> FlhC
Description: Translation of FlhC
Type: translation
Pathway Components: flhDC_mRNA -> FlhC
Components:
Function Name Type
product FlhC protein
reactant flhDC_mRNA RNA
ecpA_mRNA EcpA
Name: ecpA_mRNA -> EcpA
Description: Translation of EcpA
Type: translation
Pathway Components: ecpA_mRNA -> EcpA
Components:
Function Name Type
product EcpA protein
reactant ecpA_mRNA RNA



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