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LrhA Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
FlhC fimE_mRNA fimE FlhD FlhC FimE leuO_mRNA lrhA_mRNA leuO lrhA LeuO LrhA flhDC flhDC_mRNA FlhD


Gensor Unit       
Name: LrhA
Classification:
Groups: Transcription
Replication, recombination and repair
Gene Ontology Terms (GO): biological_process GO:0015074 - DNA integration
GO:0006310 - DNA recombination
GO:0044780 - bacterial-type flagellum assembly
GO:0044781 - bacterial-type flagellum organization
GO:0045892 - negative regulation of transcription, DNA-templated
GO:0045893 - positive regulation of transcription, DNA-templated
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cellular_component GO:0005737 - cytoplasm
GO:0005829 - cytosol
GO:0032993 - protein-DNA complex
molecular_function GO:0003677 - DNA binding
GO:0003700 - DNA-binding transcription factor activity
GO:0000986 - bacterial-type cis-regulatory region sequence-specific DNA binding
GO:0046872 - metal ion binding
GO:0043565 - sequence-specific DNA binding
Components:
  Function Name Type
  protein FimE protein
  protein FlhC protein
  protein FlhD protein
  complex FlhD-FlhC complex
  protein LeuO protein
  protein LrhA protein
  gene fimE gene
  RNA fimE_mRNA RNA
  gene flhDC gene
  RNA flhDC_mRNA RNA
  gene leuO gene
  RNA leuO_mRNA RNA
  gene lrhA gene
  RNA lrhA_mRNA RNA


Reactions       
Showing 10 reactions
LrhA fimE fimE_mRNA
Name: fimE -> fimE_mRNA
Description: Transcription of transcription unit fimE. Reaction activation by LrhA.
Type: transcription
Pathway Components: fimE - LrhA -> fimE_mRNA
Components:
Function Name Type
activator LrhA protein
reactant fimE gene
product fimE_mRNA RNA
LrhA leuO leuO_mRNA
Name: leuO -> leuO_mRNA
Description: Transcription of transcription unit leuO. Reaction activation by LrhA.
Type: transcription
Pathway Components: leuO - LrhA -> leuO_mRNA
Components:
Function Name Type
activator LrhA protein
reactant leuO gene
product leuO_mRNA RNA
LrhA lrhA lrhA_mRNA
Name: lrhA -> lrhA_mRNA
Description: Transcription of transcription unit lrhA. Reaction activation by LrhA.
Type: transcription
Pathway Components: lrhA - LrhA -> lrhA_mRNA
Components:
Function Name Type
activator LrhA protein
reactant lrhA gene
product lrhA_mRNA RNA
LrhA flhDC flhDC_mRNA
Name: flhDC -> flhDC_mRNA
Description: Transcription of transcription unit flhDC. Reaction inhibition by LrhA.
Type: transcription
Pathway Components: flhDC - LrhA -> flhDC_mRNA
Components:
Function Name Type
inhibitor LrhA protein
reactant flhDC gene
product flhDC_mRNA RNA
fimE_mRNA FimE
Name: fimE_mRNA -> FimE
Description: Translation of FimE
Type: translation
Pathway Components: fimE_mRNA -> FimE
Components:
Function Name Type
product FimE protein
reactant fimE_mRNA RNA
flhDC_mRNA FlhD
Name: flhDC_mRNA -> FlhD
Description: Translation of FlhD
Type: translation
Pathway Components: flhDC_mRNA -> FlhD
Components:
Function Name Type
product FlhD protein
reactant flhDC_mRNA RNA
FlhD + FlhC FlhD-FlhC
Name: FlhD + FlhC -> FlhD-FlhC
Description: Reaction transforming FlhD, FlhC into FlhD-FlhC
Type: state transition
Pathway Components: FlhD + FlhC -> FlhD-FlhC
Components:
Function Name Type
reactant FlhC protein
reactant FlhD protein
product FlhD-FlhC complex
flhDC_mRNA FlhC
Name: flhDC_mRNA -> FlhC
Description: Translation of FlhC
Type: translation
Pathway Components: flhDC_mRNA -> FlhC
Components:
Function Name Type
product FlhC protein
reactant flhDC_mRNA RNA
leuO_mRNA LeuO
Name: leuO_mRNA -> LeuO
Description: Translation of LeuO
Type: translation
Pathway Components: leuO_mRNA -> LeuO
Components:
Function Name Type
product LeuO protein
reactant leuO_mRNA RNA
lrhA_mRNA LrhA
Name: lrhA_mRNA -> LrhA
Description: Translation of LrhA
Type: translation
Pathway Components: lrhA_mRNA -> LrhA
Components:
Function Name Type
product LrhA protein
reactant lrhA_mRNA RNA



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