RegulonDB RegulonDB

LexA Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
Cho D-ala D-alanyl-D-alanine D-glu DNA combined with exogenous DNA to form a recombinational junction DNA with lesion DNA without lesion DNA(N) DdlB DinB DinD DinF DinG DinI DinJ DinQ DnaG FtsA FtsI FtsK FtsL FtsQ FtsW FtsZ HokE InsK L-alanine LexA LpxC MraY MurC MurD MurE MurF MurG N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenyl-N-acetylglucosamine N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenyl-N-acetylglucosamine_Ext Phr PolB This Gensor Unit is not yet available RecA RecN RecX RpoD RpsU RuvA RuvB RuvC SbmC Ssb SulA SymE TisB UDP UDP-3-O-(3-hydroxytetradecanoyl)glucosamine UDP-3-O-(3-hydroxymyristoyl)-N-acetylglucosamine UDP-GlcNAc UDP-N-acetylmuramoyl-L-alanyl-D-glutamate UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelate UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine UDP-N-acetylmuramyl-L-Ala UDP-N-alpha-D-acetylmuramate UMP UmuC UmuD UvrA UvrB UvrC UvrD UvrY YafN YafO YafP YafQ YbfE YdjM YebG a DNA cyclobutadipyrimidine a deoxynucleoside triphosphate nucleoside 5'-monophosphate a peptidoglycan dimer (meso-diaminopimelate containing) a peptidoglycan with D,D cross-links (meso-diaminopimelate containing) a short RNA Segment a single stranded DNA ssRNA acetate mRNA cho cho_mRNA UPP (ambiguous) ditrans,polycis-undecaprenyl phosphate dinB-yafNOP dinB-yafNOP_mRNA dinD dinD_mRNA dinG dinG_mRNA dinI dinI_mRNA dinJ-yafQ dinJ-yafQ_mRNA dinQ dinQ_mRNA PP ftsK ftsK_mRNA ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC_mRNA hokE hokE_mRNA insK insK_mRNA lexA-dinF lexA-dinF_mRNA M-DAP This Gensor Unit is not yet available This Gensor Unit is not yet available peptidoglycan D-alanyl-DAP crosslink peptidoglycan tetrapeptide, glycan chain 1 peptidoglycan tetrapeptide, glycan chain 2 phosphate phr phr_mRNA polB polB_mRNA recA recAX recAX_mRNA recA_mRNA recN recN_mRNA resolution of recombinational junction formation of two intact strands rpsU-dnaG-rpoD rpsU-dnaG-rpoD_mRNA ruvAB ruvAB_mRNA sbmC sbmC_mRNA ssb ssb_mRNA sulA sulA_mRNA symE symE_mRNA tisB tisB_mRNA umuDC umuDC_mRNA uvrA uvrA_mRNA uvrB uvrB_mRNA This Gensor Unit is not yet available This Gensor Unit is not yet available uvrD uvrD_mRNA uvrYC uvrYC_mRNA yafNOP yafNOP_mRNA ybfE ybfE_mRNA ydjM ydjM_mRNA yebG yebG_mRNA |DNA-Adjacent-Pyrimidines| UmuC UmuD UvrD UvrA UvrC UvrB RuvC RuvB RuvA phosphate phosphate phosphate phosphate MolR_1


Gensor Unit       
Name: LexA
Classification:
Groups: General function prediction only
Inorganic ion transport and metabolism
Mobilome: prophages, transposons
Posttranslational modification, protein turnover, chaperones
Transcription
Replication, recombination and repair
Signal transduction mechanisms
Defense mechanisms
Cell wall/membrane/envelope biogenesis
Cell cycle control, cell division, chromosome partitioning
Translation, ribosomal structure and biogenesis
Gene Ontology Terms (GO): biological_process GO:0071897 - DNA biosynthetic process
GO:0032508 - DNA duplex unwinding
GO:0015074 - DNA integration
GO:0006259 - DNA metabolic process
GO:0006310 - DNA recombination
GO:0006281 - DNA repair
Read more >
cellular_component GO:0009355 - DNA polymerase V complex
GO:0009379 - Holliday junction helicase complex
GO:0048476 - Holliday junction resolvase complex
GO:0043590 - bacterial nucleoid
GO:0032153 - cell division site
GO:0005737 - cytoplasm
GO:0009898 - cytoplasmic side of plasma membrane
Read more >
molecular_function GO:0008408 - 3'-5' exonuclease activity
GO:0008296 - 3'-5'-exodeoxyribonuclease activity
GO:0051539 - 4 iron, 4 sulfur cluster binding
GO:0005524 - ATP binding
GO:0016887 - ATPase activity
GO:0008716 - D-alanine-D-alanine ligase activity
GO:0003677 - DNA binding
Read more >
Components:
  Function Name Type
  simple_molecule 5'-UMP simple_molecule
  simple_molecule 5'-phosphooligonucleotide simple_molecule
  protein Cho protein
  simple_molecule DNA combined with exogenous DNA to form a recombinational junction simple_molecule
  simple_molecule DNA with lesion simple_molecule
  simple_molecule DNA without lesion simple_molecule
  simple_molecule DNA(N) simple_molecule
  simple_molecule DNA-Cytidines simple_molecule
  simple_molecule DNA-deoxycytidine-dimer simple_molecule
  simple_molecule DNA-deoxycytidine-thymidine-dimer simple_molecule
  simple_molecule DNA-thymidine-dimer simple_molecule
  simple_molecule DNA-thymidines simple_molecule
  protein DdlB protein
  protein DinB protein
  protein DinD protein
  protein DinF protein
  protein DinG protein
  protein DinI protein
  protein DinJ protein
  protein DinQ protein
  protein DnaB protein
  complex DnaB-DnaT-PriB-PriA-PriC-DnaG complex
  protein DnaG protein
  protein DnaT protein
  protein FtsA protein
  protein FtsB protein
  protein FtsI protein
  protein FtsK protein
  protein FtsL protein
  protein FtsQ protein
  complex FtsQ-FtsB-FtsL complex
  protein FtsW protein
  protein FtsZ protein
  protein HokE protein
  protein InsK protein
  protein LexA protein
  protein LpxC protein
  simple_molecule M-DAP simple_molecule
  protein MraY protein
  protein MurC protein
  protein MurD protein
  protein MurE protein
  protein MurF protein
  protein MurG protein
  protein NP protein
  protein Phr protein
  protein PolB protein
  protein PriA protein
  protein PriB protein
  protein PriC protein
  protein PtrA protein
  protein RecA protein
  protein RecB protein
  protein RecC protein
  protein RecD protein
  complex RecD-RecC-RecB complex
  protein RecN protein
  protein RecQ protein
  protein RecX protein
  protein RpoA protein
  protein RpoB protein
  complex RpoB-RpoC-RpoA-RpoD complex
  protein RpoC protein
  protein RpoD protein
  protein RpsA protein
  complex RpsA-RpsB-RpsC-RpsD-RpsE-RpsF-RpsG-RpsH-RpsI-RpsJ-RpsK-RpsL-RpsM-RpsN-RpsO-RpsP-RpsQ-RpsR-RpsS-RpsT-RpsU-Sra complex
  protein RpsB protein
  protein RpsC protein
  protein RpsD protein
  protein RpsE protein
  protein RpsF protein
  protein RpsG protein
  protein RpsH protein
  protein RpsI protein
  protein RpsJ protein
  protein RpsK protein
  protein RpsL protein
  protein RpsM protein
  protein RpsN protein
  protein RpsO protein
  protein RpsP protein
  protein RpsQ protein
  protein RpsR protein
  protein RpsS protein
  protein RpsT protein
  protein RpsU protein
  protein RuvA protein
  protein RuvB protein
  protein RuvC protein
  complex RuvC-RuvB-RuvA complex
  protein SbmC protein
  protein Sra protein
  protein Ssb protein
  protein SulA protein
  protein SymE protein
  protein TisB protein
  simple_molecule UDP-3-O-(3-hydroxymyristoyl)-N-acetylglucosamine simple_molecule
  simple_molecule UDP-3-O-(3-hydroxytetradecanoyl)glucosamine simple_molecule
  simple_molecule UDP-GlcNAc simple_molecule
  simple_molecule UDP-MurNAc simple_molecule
  simple_molecule UDP-MurNAc-L-Ala-γ-D-Glu-meso-A2pm simple_molecule
  simple_molecule UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate simple_molecule
  simple_molecule UDP-N-acetyl-α-D-muramyl-L-Ala simple_molecule
  simple_molecule UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine simple_molecule
  simple_molecule UmuB simple_molecule
  protein UmuC protein
  complex UmuC-UmuD complex
  protein UmuD protein
  protein UvrA protein
  protein UvrB protein
  complex UvrB-UvrC-UvrA complex
  protein UvrC protein
  protein UvrD protein
  protein UvrY protein
  protein YafN protein
  protein YafO protein
  protein YafP protein
  protein YafQ protein
  complex YafQ-DinJ complex
  protein YbfE protein
  protein YbiB protein
  protein YdjM protein
  protein YebG protein
  simple_molecule a polynucleotide simple_molecule
  simple_molecule a-double-stranded-DNA-with-a-blunt-end simple_molecule
  simple_molecule acetate simple_molecule
  simple_molecule ala simple_molecule
  simple_molecule alanine simple_molecule
  simple_molecule alanyl-D-alanine simple_molecule
  gene cho gene
  RNA cho_mRNA RNA
  simple_molecule deoxynucleoside triphosphate simple_molecule
  gene dinB-yafNOP gene
  RNA dinB-yafNOP_mRNA RNA
  gene dinD gene
  RNA dinD_mRNA RNA
  gene dinG-ybiB gene
  RNA dinG-ybiB_mRNA RNA
  gene dinI gene
  RNA dinI_mRNA RNA
  gene dinJ-yafQ gene
  RNA dinJ-yafQ_mRNA RNA
  gene dinQ gene
  RNA dinQ_mRNA RNA
  simple_molecule diphosphate simple_molecule
  simple_molecule ditrans,polycis-undecaprenyl phosphate simple_molecule
  simple_molecule double stranded DNA simple_molecule
  simple_molecule double-helix DNA simple_molecule
  gene ftsK gene
  RNA ftsK_mRNA RNA
  gene ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC gene
  RNA ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC_mRNA RNA
  simple_molecule glu simple_molecule
  gene hokE gene
  RNA hokE_mRNA RNA
  gene insK gene
  RNA insK_mRNA RNA
  gene lexA-dinF gene
  RNA lexA-dinF_mRNA RNA
  simple_molecule light simple_molecule
  simple_molecule lipid I simple_molecule
  simple_molecule lipid II simple_molecule
  simple_molecule mRNA simple_molecule
  simple_molecule mRNA fragments simple_molecule
  gene molR_1 gene
  RNA molR_1_mRNA RNA
  simple_molecule mononucleotide simple_molecule
  simple_molecule nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine) pentapeptide simple_molecule
  simple_molecule nascent peptidoglycan with D,D cross-links (meso-diaminopimelate containing) simple_molecule
  simple_molecule nucleoside triphosphate simple_molecule
  simple_molecule peptide simple_molecule
  simple_molecule peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine) tetrapeptide simple_molecule
  simple_molecule phosphate simple_molecule
  gene phr gene
  RNA phr_mRNA RNA
  gene polB gene
  RNA polB_mRNA RNA
  simple_molecule protein simple_molecule
  gene ptrA gene
  gene ptrA-recBD gene
  RNA ptrA-recBD_mRNA RNA
  RNA ptrA_mRNA RNA
  gene recA gene
  gene recAX gene
  RNA recAX_mRNA RNA
  RNA recA_mRNA RNA
  gene recN gene
  RNA recN_mRNA RNA
  gene recQ gene
  RNA recQ_mRNA RNA
  simple_molecule resolution of recombinational junction formation of two intact strands simple_molecule
  gene rpsU-dnaG-rpoD gene
  RNA rpsU-dnaG-rpoD_mRNA RNA
  gene ruvAB gene
  RNA ruvAB_mRNA RNA
  gene sbmC gene
  RNA sbmC_mRNA RNA
  simple_molecule single stranded DNA simple_molecule
  simple_molecule ssDNA-RNA-primer-hybrid simple_molecule
  gene ssb gene
  RNA ssb_mRNA RNA
  gene sulA gene
  RNA sulA_mRNA RNA
  simple_molecule supercoiled duplex DNA simple_molecule
  gene symE gene
  RNA symE_mRNA RNA
  gene tisB gene
  RNA tisB_mRNA RNA
  gene umuDC gene
  RNA umuDC_mRNA RNA
  simple_molecule unwound double-stranded DNA simple_molecule
  simple_molecule uridine-diphosphate simple_molecule
  gene uvrA gene
  RNA uvrA_mRNA RNA
  gene uvrB gene
  RNA uvrB_mRNA RNA
  gene uvrC gene
  RNA uvrC_mRNA RNA
  gene uvrD gene
  RNA uvrD_mRNA RNA
  gene uvrYC gene
  RNA uvrYC_mRNA RNA
  gene yafNOP gene
  RNA yafNOP_mRNA RNA
  gene ybfE gene
  RNA ybfE_mRNA RNA
  gene ydjM gene
  RNA ydjM_mRNA RNA
  gene yebG gene
  RNA yebG_mRNA RNA


Reactions       
Showing 138 reactions
LexA cho cho_mRNA
Name: cho -> cho_mRNA
Description: Transcription of transcription unit cho. Reaction inhibition by LexA.
Type: transcription
Pathway Components: cho - LexA -> cho_mRNA
Components:
Function Name Type
inhibitor LexA protein
reactant cho gene
product cho_mRNA RNA
LexA dinB-yafNOP dinB-yafNOP_mRNA
Name: dinB-yafNOP -> dinB-yafNOP_mRNA
Description: Transcription of transcription unit dinB-yafNOP. Reaction inhibition by LexA.
Type: transcription
Pathway Components: dinB-yafNOP - LexA -> dinB-yafNOP_mRNA
Components:
Function Name Type
inhibitor LexA protein
reactant dinB-yafNOP gene
product dinB-yafNOP_mRNA RNA
LexA dinD dinD_mRNA
Name: dinD -> dinD_mRNA
Description: Transcription of transcription unit dinD. Reaction inhibition by LexA.
Type: transcription
Pathway Components: dinD - LexA -> dinD_mRNA
Components:
Function Name Type
inhibitor LexA protein
reactant dinD gene
product dinD_mRNA RNA
LexA dinG-ybiB dinG-ybiB_mRNA
Name: dinG-ybiB -> dinG-ybiB_mRNA
Description: Transcription of transcription unit dinG-ybiB. Reaction inhibition by LexA.
Type: transcription
Pathway Components: dinG-ybiB - LexA -> dinG-ybiB_mRNA
Components:
Function Name Type
inhibitor LexA protein
reactant dinG-ybiB gene
product dinG-ybiB_mRNA RNA
LexA dinI dinI_mRNA
Name: dinI -> dinI_mRNA
Description: Transcription of transcription unit dinI. Reaction inhibition by LexA.
Type: transcription
Pathway Components: dinI - LexA -> dinI_mRNA
Components:
Function Name Type
inhibitor LexA protein
reactant dinI gene
product dinI_mRNA RNA
LexA dinJ-yafQ dinJ-yafQ_mRNA
Name: dinJ-yafQ -> dinJ-yafQ_mRNA
Description: Transcription of transcription unit dinJ-yafQ. Reaction inhibition by LexA.
Type: transcription
Pathway Components: dinJ-yafQ - LexA -> dinJ-yafQ_mRNA
Components:
Function Name Type
inhibitor LexA protein
reactant dinJ-yafQ gene
product dinJ-yafQ_mRNA RNA
LexA dinQ dinQ_mRNA
Name: dinQ -> dinQ_mRNA
Description: Transcription of transcription unit dinQ. Reaction inhibition by LexA.
Type: transcription
Pathway Components: dinQ - LexA -> dinQ_mRNA
Components:
Function Name Type
inhibitor LexA protein
reactant dinQ gene
product dinQ_mRNA RNA
LexA ftsK ftsK_mRNA
Name: ftsK -> ftsK_mRNA
Description: Transcription of transcription unit ftsK. Reaction inhibition by LexA.
Type: transcription
Pathway Components: ftsK - LexA -> ftsK_mRNA
Components:
Function Name Type
inhibitor LexA protein
reactant ftsK gene
product ftsK_mRNA RNA
LexA ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC_mRNA
Name: ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC -> ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC_mRNA
Description: Transcription of transcription unit ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC. Reaction inhibition by LexA.
Type: transcription
Pathway Components: ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC - LexA -> ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC_mRNA
Components:
Function Name Type
inhibitor LexA protein
reactant ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC gene
product ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC_mRNA RNA
LexA hokE hokE_mRNA
Name: hokE -> hokE_mRNA
Description: Transcription of transcription unit hokE. Reaction inhibition by LexA.
Type: transcription
Pathway Components: hokE - LexA -> hokE_mRNA
Components:
Function Name Type
inhibitor LexA protein
reactant hokE gene
product hokE_mRNA RNA
LexA insK insK_mRNA
Name: insK -> insK_mRNA
Description: Transcription of transcription unit insK. Reaction inhibition by LexA.
Type: transcription
Pathway Components: insK - LexA -> insK_mRNA
Components:
Function Name Type
inhibitor LexA protein
reactant insK gene
product insK_mRNA RNA
LexA lexA-dinF lexA-dinF_mRNA
Name: lexA-dinF -> lexA-dinF_mRNA
Description: Transcription of transcription unit lexA-dinF. Reaction inhibition by LexA.
Type: transcription
Pathway Components: lexA-dinF - LexA -> lexA-dinF_mRNA
Components:
Function Name Type
inhibitor LexA protein
reactant lexA-dinF gene
product lexA-dinF_mRNA RNA
LexA molR_1 molR_1_mRNA
Name: molR_1 -> molR_1_mRNA
Description: Transcription of transcription unit molR_1. Reaction inhibition by LexA.
Type: transcription
Pathway Components: molR_1 - LexA -> molR_1_mRNA
Components:
Function Name Type
inhibitor LexA protein
reactant molR_1 gene
product molR_1_mRNA RNA
LexA phr phr_mRNA
Name: phr -> phr_mRNA
Description: Transcription of transcription unit phr. Reaction inhibition by LexA.
Type: transcription
Pathway Components: phr - LexA -> phr_mRNA
Components:
Function Name Type
inhibitor LexA protein
reactant phr gene
product phr_mRNA RNA
LexA polB polB_mRNA
Name: polB -> polB_mRNA
Description: Transcription of transcription unit polB. Reaction inhibition by LexA.
Type: transcription
Pathway Components: polB - LexA -> polB_mRNA
Components:
Function Name Type
inhibitor LexA protein
reactant polB gene
product polB_mRNA RNA
LexA ptrA ptrA_mRNA
Name: ptrA -> ptrA_mRNA
Description: Transcription of transcription unit ptrA. Reaction inhibition by LexA.
Type: transcription
Pathway Components: ptrA - LexA -> ptrA_mRNA
Components:
Function Name Type
inhibitor LexA protein
reactant ptrA gene
product ptrA_mRNA RNA
LexA ptrA-recBD ptrA-recBD_mRNA
Name: ptrA-recBD -> ptrA-recBD_mRNA
Description: Transcription of transcription unit ptrA-recBD. Reaction inhibition by LexA.
Type: transcription
Pathway Components: ptrA-recBD - LexA -> ptrA-recBD_mRNA
Components:
Function Name Type
inhibitor LexA protein
reactant ptrA-recBD gene
product ptrA-recBD_mRNA RNA
LexA recA recA_mRNA
Name: recA -> recA_mRNA
Description: Transcription of transcription unit recA. Reaction inhibition by LexA.
Type: transcription
Pathway Components: recA - LexA -> recA_mRNA
Components:
Function Name Type
inhibitor LexA protein
reactant recA gene
product recA_mRNA RNA
LexA recAX recAX_mRNA
Name: recAX -> recAX_mRNA
Description: Transcription of transcription unit recAX. Reaction inhibition by LexA.
Type: transcription
Pathway Components: recAX - LexA -> recAX_mRNA
Components:
Function Name Type
inhibitor LexA protein
reactant recAX gene
product recAX_mRNA RNA
LexA recN recN_mRNA
Name: recN -> recN_mRNA
Description: Transcription of transcription unit recN. Reaction inhibition by LexA.
Type: transcription
Pathway Components: recN - LexA -> recN_mRNA
Components:
Function Name Type
inhibitor LexA protein
reactant recN gene
product recN_mRNA RNA
LexA recQ recQ_mRNA
Name: recQ -> recQ_mRNA
Description: Transcription of transcription unit recQ. Reaction inhibition by LexA.
Type: transcription
Pathway Components: recQ - LexA -> recQ_mRNA
Components:
Function Name Type
inhibitor LexA protein
reactant recQ gene
product recQ_mRNA RNA
LexA rpsU-dnaG-rpoD rpsU-dnaG-rpoD_mRNA
Name: rpsU-dnaG-rpoD -> rpsU-dnaG-rpoD_mRNA
Description: Transcription of transcription unit rpsU-dnaG-rpoD. Reaction inhibition by LexA.
Type: transcription
Pathway Components: rpsU-dnaG-rpoD - LexA -> rpsU-dnaG-rpoD_mRNA
Components:
Function Name Type
inhibitor LexA protein
reactant rpsU-dnaG-rpoD gene
product rpsU-dnaG-rpoD_mRNA RNA
LexA ruvAB ruvAB_mRNA
Name: ruvAB -> ruvAB_mRNA
Description: Transcription of transcription unit ruvAB. Reaction inhibition by LexA.
Type: transcription
Pathway Components: ruvAB - LexA -> ruvAB_mRNA
Components:
Function Name Type
inhibitor LexA protein
reactant ruvAB gene
product ruvAB_mRNA RNA
LexA sbmC sbmC_mRNA
Name: sbmC -> sbmC_mRNA
Description: Transcription of transcription unit sbmC. Reaction inhibition by LexA.
Type: transcription
Pathway Components: sbmC - LexA -> sbmC_mRNA
Components:
Function Name Type
inhibitor LexA protein
reactant sbmC gene
product sbmC_mRNA RNA
LexA ssb ssb_mRNA
Name: ssb -> ssb_mRNA
Description: Transcription of transcription unit ssb. Reaction inhibition by LexA.
Type: transcription
Pathway Components: ssb - LexA -> ssb_mRNA
Components:
Function Name Type
inhibitor LexA protein
reactant ssb gene
product ssb_mRNA RNA
LexA sulA sulA_mRNA
Name: sulA -> sulA_mRNA
Description: Transcription of transcription unit sulA. Reaction inhibition by LexA.
Type: transcription
Pathway Components: sulA - LexA -> sulA_mRNA
Components:
Function Name Type
inhibitor LexA protein
reactant sulA gene
product sulA_mRNA RNA
LexA symE symE_mRNA
Name: symE -> symE_mRNA
Description: Transcription of transcription unit symE. Reaction inhibition by LexA.
Type: transcription
Pathway Components: symE - LexA -> symE_mRNA
Components:
Function Name Type
inhibitor LexA protein
reactant symE gene
product symE_mRNA RNA
LexA tisB tisB_mRNA
Name: tisB -> tisB_mRNA
Description: Transcription of transcription unit tisB. Reaction inhibition by LexA.
Type: transcription
Pathway Components: tisB - LexA -> tisB_mRNA
Components:
Function Name Type
inhibitor LexA protein
reactant tisB gene
product tisB_mRNA RNA
LexA umuDC umuDC_mRNA
Name: umuDC -> umuDC_mRNA
Description: Transcription of transcription unit umuDC. Reaction inhibition by LexA.
Type: transcription
Pathway Components: umuDC - LexA -> umuDC_mRNA
Components:
Function Name Type
inhibitor LexA protein
reactant umuDC gene
product umuDC_mRNA RNA
LexA uvrA uvrA_mRNA
Name: uvrA -> uvrA_mRNA
Description: Transcription of transcription unit uvrA. Reaction inhibition by LexA.
Type: transcription
Pathway Components: uvrA - LexA -> uvrA_mRNA
Components:
Function Name Type
inhibitor LexA protein
reactant uvrA gene
product uvrA_mRNA RNA
LexA uvrB uvrB_mRNA
Name: uvrB -> uvrB_mRNA
Description: Transcription of transcription unit uvrB. Reaction inhibition by LexA.
Type: transcription
Pathway Components: uvrB - LexA -> uvrB_mRNA
Components:
Function Name Type
inhibitor LexA protein
reactant uvrB gene
product uvrB_mRNA RNA
LexA uvrC uvrC_mRNA
Name: uvrC -> uvrC_mRNA
Description: Transcription of transcription unit uvrC. Reaction inhibition by LexA.
Type: transcription
Pathway Components: uvrC - LexA -> uvrC_mRNA
Components:
Function Name Type
inhibitor LexA protein
reactant uvrC gene
product uvrC_mRNA RNA
LexA uvrD uvrD_mRNA
Name: uvrD -> uvrD_mRNA
Description: Transcription of transcription unit uvrD. Reaction inhibition by LexA.
Type: transcription
Pathway Components: uvrD - LexA -> uvrD_mRNA
Components:
Function Name Type
inhibitor LexA protein
reactant uvrD gene
product uvrD_mRNA RNA
LexA uvrYC uvrYC_mRNA
Name: uvrYC -> uvrYC_mRNA
Description: Transcription of transcription unit uvrYC. Reaction inhibition by LexA.
Type: transcription
Pathway Components: uvrYC - LexA -> uvrYC_mRNA
Components:
Function Name Type
inhibitor LexA protein
reactant uvrYC gene
product uvrYC_mRNA RNA
LexA yafNOP yafNOP_mRNA
Name: yafNOP -> yafNOP_mRNA
Description: Transcription of transcription unit yafNOP. Reaction inhibition by LexA.
Type: transcription
Pathway Components: yafNOP - LexA -> yafNOP_mRNA
Components:
Function Name Type
inhibitor LexA protein
reactant yafNOP gene
product yafNOP_mRNA RNA
LexA ybfE ybfE_mRNA
Name: ybfE -> ybfE_mRNA
Description: Transcription of transcription unit ybfE. Reaction inhibition by LexA.
Type: transcription
Pathway Components: ybfE - LexA -> ybfE_mRNA
Components:
Function Name Type
inhibitor LexA protein
reactant ybfE gene
product ybfE_mRNA RNA
LexA ydjM ydjM_mRNA
Name: ydjM -> ydjM_mRNA
Description: Transcription of transcription unit ydjM. Reaction inhibition by LexA.
Type: transcription
Pathway Components: ydjM - LexA -> ydjM_mRNA
Components:
Function Name Type
inhibitor LexA protein
reactant ydjM gene
product ydjM_mRNA RNA
LexA yebG yebG_mRNA
Name: yebG -> yebG_mRNA
Description: Transcription of transcription unit yebG. Reaction inhibition by LexA.
Type: transcription
Pathway Components: yebG - LexA -> yebG_mRNA
Components:
Function Name Type
inhibitor LexA protein
reactant yebG gene
product yebG_mRNA RNA
ftsK_mRNA FtsK
Name: ftsK_mRNA -> FtsK
Description: Translation of FtsK
Type: translation
Pathway Components: ftsK_mRNA -> FtsK
Components:
Function Name Type
product FtsK protein
reactant ftsK_mRNA RNA
yebG_mRNA YebG
Name: yebG_mRNA -> YebG
Description: Translation of YebG
Type: translation
Pathway Components: yebG_mRNA -> YebG
Components:
Function Name Type
product YebG protein
reactant yebG_mRNA RNA
rpsU-dnaG-rpoD_mRNA RpsU
Name: rpsU-dnaG-rpoD_mRNA -> RpsU
Description: Translation of RpsU
Type: translation
Pathway Components: rpsU-dnaG-rpoD_mRNA -> RpsU
Components:
Function Name Type
product RpsU protein
reactant rpsU-dnaG-rpoD_mRNA RNA
Protein Monomers Protein complex
Name: RpsK + RpsB + RpsC + RpsJ + RpsE + RpsR + RpsF + RpsL + RpsG + RpsM + RpsS + RpsD + RpsA + RpsU + RpsH + RpsN + RpsO + RpsI + RpsT + RpsQ + RpsP + Sra -> RpsA-RpsB-RpsC-RpsD-RpsE-RpsF-RpsG-RpsH-RpsI-RpsJ-RpsK-RpsL-RpsM-RpsN-RpsO-RpsP-RpsQ-RpsR-RpsS-RpsT-RpsU-Sra
Description: Reaction transforming RpsK, RpsB, RpsC, RpsJ, RpsE, RpsR, RpsF, RpsL, RpsG, RpsM, RpsS, RpsD, RpsA, RpsU, RpsH, RpsN, RpsO, RpsI, RpsT, RpsQ, RpsP, Sra into RpsA-RpsB-RpsC-RpsD-RpsE-RpsF-RpsG-RpsH-RpsI-RpsJ-RpsK-RpsL-RpsM-RpsN-RpsO-RpsP-RpsQ-RpsR-RpsS-RpsT-RpsU-Sra
Type: state transition
Pathway Components: RpsK + RpsB + RpsC + RpsJ + RpsE + RpsR + RpsF + RpsL + RpsG + RpsM + RpsS + RpsD + RpsA + RpsU + RpsH + RpsN + RpsO + RpsI + RpsT + RpsQ + RpsP + Sra -> RpsA-RpsB-RpsC-RpsD-RpsE-RpsF-RpsG-RpsH-RpsI-RpsJ-RpsK-RpsL-RpsM-RpsN-RpsO-RpsP-RpsQ-RpsR-RpsS-RpsT-RpsU-Sra
Components: Show/Hide Components Table
rpsU-dnaG-rpoD_mRNA DnaG
Name: rpsU-dnaG-rpoD_mRNA -> DnaG
Description: Translation of DnaG
Type: translation
Pathway Components: rpsU-dnaG-rpoD_mRNA -> DnaG
Components:
Function Name Type
product DnaG protein
reactant rpsU-dnaG-rpoD_mRNA RNA
DnaT + DnaB + PriC + DnaG + PriB + PriA DnaB-DnaT-PriB-PriA-PriC-DnaG
Name: DnaT + DnaB + PriC + DnaG + PriB + PriA -> DnaB-DnaT-PriB-PriA-PriC-DnaG
Description: Reaction transforming DnaT, DnaB, PriC, DnaG, PriB, PriA into DnaB-DnaT-PriB-PriA-PriC-DnaG
Type: state transition
Pathway Components: DnaT + DnaB + PriC + DnaG + PriB + PriA -> DnaB-DnaT-PriB-PriA-PriC-DnaG
Components:
Function Name Type
reactant DnaB protein
product DnaB-DnaT-PriB-PriA-PriC-DnaG complex
reactant DnaG protein
reactant DnaT protein
reactant PriA protein
reactant PriB protein
reactant PriC protein
DnaG nucleoside triphosphate + single stranded DNA ssDNA-RNA-primer-hybrid + diphosphate
Name: nucleoside triphosphate + single stranded DNA -> ssDNA-RNA-primer-hybrid + diphosphate
Description: Reaction transforming nucleoside triphosphate, single stranded DNA into ssDNA-RNA-primer-hybrid, diphosphate
Type: state transition
Pathway Components: nucleoside triphosphate + single stranded DNA - DnaG -> ssDNA-RNA-primer-hybrid + diphosphate
Components:
Function Name Type
catalyzer DnaG protein
product diphosphate simple_molecule
reactant nucleoside triphosphate simple_molecule
reactant single stranded DNA simple_molecule
product ssDNA-RNA-primer-hybrid