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HdfR Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
GltD GltF HdfR FlhD flhDC_mRNA FlhD FlhC gltBDF_mRNA FlhC GltD GltB gltBDF flhDC GltB


Gensor Unit       
Name: HdfR
Classification:
Groups: Amino acid transport and metabolism
Gene Ontology Terms (GO): biological_process GO:0097054 - L-glutamate biosynthetic process
GO:0019676 - ammonia assimilation cycle
GO:0044780 - bacterial-type flagellum assembly
GO:0044781 - bacterial-type flagellum organization
GO:0008652 - cellular amino acid biosynthetic process
GO:0006537 - glutamate biosynthetic process
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cellular_component GO:0005737 - cytoplasm
GO:0005829 - cytosol
GO:0016021 - integral component of membrane
GO:0016020 - membrane
GO:0030288 - outer membrane-bounded periplasmic space
GO:0005886 - plasma membrane
molecular_function GO:0051538 - 3 iron, 4 sulfur cluster binding
GO:0051539 - 4 iron, 4 sulfur cluster binding
GO:0003677 - DNA binding
GO:0003824 - catalytic activity
GO:0004354 - glutamate dehydrogenase (NADP+) activity
GO:0004355 - glutamate synthase (NADPH) activity
GO:0015930 - glutamate synthase activity
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Components:
  Function Name Type
  protein FlhC protein
  protein FlhD protein
  complex FlhD-FlhC complex
  protein GltB protein
  protein GltD protein
  complex GltD-GltB complex
  protein GltF protein
  protein HdfR protein
  gene flhDC gene
  RNA flhDC_mRNA RNA
  gene gltBDF gene
  RNA gltBDF_mRNA RNA


Reactions       
Showing 9 reactions
HdfR gltBDF gltBDF_mRNA
Name: gltBDF -> gltBDF_mRNA
Description: Transcription of transcription unit gltBDF. Reaction activation by HdfR.
Type: transcription
Pathway Components: gltBDF - HdfR -> gltBDF_mRNA
Components:
Function Name Type
activator HdfR protein
reactant gltBDF gene
product gltBDF_mRNA RNA
HdfR flhDC flhDC_mRNA
Name: flhDC -> flhDC_mRNA
Description: Transcription of transcription unit flhDC. Reaction inhibition by HdfR.
Type: transcription
Pathway Components: flhDC - HdfR -> flhDC_mRNA
Components:
Function Name Type
inhibitor HdfR protein
reactant flhDC gene
product flhDC_mRNA RNA
flhDC_mRNA FlhD
Name: flhDC_mRNA -> FlhD
Description: Translation of FlhD
Type: translation
Pathway Components: flhDC_mRNA -> FlhD
Components:
Function Name Type
product FlhD protein
reactant flhDC_mRNA RNA
FlhD + FlhC FlhD-FlhC
Name: FlhD + FlhC -> FlhD-FlhC
Description: Reaction transforming FlhD, FlhC into FlhD-FlhC
Type: state transition
Pathway Components: FlhD + FlhC -> FlhD-FlhC
Components:
Function Name Type
reactant FlhC protein
reactant FlhD protein
product FlhD-FlhC complex
flhDC_mRNA FlhC
Name: flhDC_mRNA -> FlhC
Description: Translation of FlhC
Type: translation
Pathway Components: flhDC_mRNA -> FlhC
Components:
Function Name Type
product FlhC protein
reactant flhDC_mRNA RNA
gltBDF_mRNA GltB
Name: gltBDF_mRNA -> GltB
Description: Translation of GltB
Type: translation
Pathway Components: gltBDF_mRNA -> GltB
Components:
Function Name Type
product GltB protein
reactant gltBDF_mRNA RNA
GltD + GltB GltD-GltB
Name: GltD + GltB -> GltD-GltB
Description: Reaction transforming GltD, GltB into GltD-GltB
Type: state transition
Pathway Components: GltD + GltB -> GltD-GltB
Components:
Function Name Type
reactant GltB protein
reactant GltD protein
product GltD-GltB complex
gltBDF_mRNA GltD
Name: gltBDF_mRNA -> GltD
Description: Translation of GltD
Type: translation
Pathway Components: gltBDF_mRNA -> GltD
Components:
Function Name Type
product GltD protein
reactant gltBDF_mRNA RNA
gltBDF_mRNA GltF
Name: gltBDF_mRNA -> GltF
Description: Translation of GltF
Type: translation
Pathway Components: gltBDF_mRNA -> GltF
Components:
Function Name Type
product GltF protein
reactant gltBDF_mRNA RNA



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