Showing 29 reactions
phosphate + BasR
BasR-phosphate
Name:
phosphate + BasR -> BasR-phosphate
Description:
Reaction transforming phosphate, BasR into BasR-phosphate
Type:
state transition
Pathway Components:
phosphate + BasR -> BasR-phosphate
Components:
Function
Name
Type
reactant
BasR
protein
product
BasR-phosphate
complex
reactant
phosphate
simple_molecule
BasR-phosphate
csgDEFG
csgDEFG_mRNA
Name:
csgDEFG -> csgDEFG_mRNA
Description:
Transcription of transcription unit csgDEFG. Reaction activation by BasR-phosphate.
Type:
transcription
Pathway Components:
csgDEFG - BasR-phosphate -> csgDEFG_mRNA
Components:
Function
Name
Type
activator
BasR-phosphate
complex
reactant
csgDEFG
gene
product
csgDEFG_mRNA
RNA
BasR-phosphate
cspI
cspI_mRNA
Name:
cspI -> cspI_mRNA
Description:
Transcription of transcription unit cspI. Reaction activation by BasR-phosphate.
Type:
transcription
Pathway Components:
cspI - BasR-phosphate -> cspI_mRNA
Components:
Function
Name
Type
activator
BasR-phosphate
complex
reactant
cspI
gene
product
cspI_mRNA
RNA
BasR-phosphate
dgkA
dgkA_mRNA
Name:
dgkA -> dgkA_mRNA
Description:
Transcription of transcription unit dgkA. Reaction activation by BasR-phosphate.
Type:
transcription
Pathway Components:
dgkA - BasR-phosphate -> dgkA_mRNA
Components:
Function
Name
Type
activator
BasR-phosphate
complex
reactant
dgkA
gene
product
dgkA_mRNA
RNA
BasR-phosphate
fimB
fimB_mRNA
Name:
fimB -> fimB_mRNA
Description:
Transcription of transcription unit fimB. Reaction activation by BasR-phosphate.
Type:
transcription
Pathway Components:
fimB - BasR-phosphate -> fimB_mRNA
Components:
Function
Name
Type
activator
BasR-phosphate
complex
reactant
fimB
gene
product
fimB_mRNA
RNA
BasR-phosphate
qseBC
qseBC_mRNA
Name:
qseBC -> qseBC_mRNA
Description:
Transcription of transcription unit qseBC. Reaction activation by BasR-phosphate.
Type:
transcription
Pathway Components:
qseBC - BasR-phosphate -> qseBC_mRNA
Components:
Function
Name
Type
activator
BasR-phosphate
complex
reactant
qseBC
gene
product
qseBC_mRNA
RNA
BasR-phosphate
tomB-hha
tomB-hha_mRNA
Name:
tomB-hha -> tomB-hha_mRNA
Description:
Transcription of transcription unit tomB-hha. Reaction activation by BasR-phosphate.
Type:
transcription
Pathway Components:
tomB-hha - BasR-phosphate -> tomB-hha_mRNA
Components:
Function
Name
Type
activator
BasR-phosphate
complex
reactant
tomB-hha
gene
product
tomB-hha_mRNA
RNA
BasR-phosphate
putA
putA_mRNA
Name:
putA -> putA_mRNA
Description:
Transcription of transcription unit putA. Reaction inhibition by BasR-phosphate.
Type:
transcription
Pathway Components:
putA - BasR-phosphate -> putA_mRNA
Components:
Function
Name
Type
inhibitor
BasR-phosphate
complex
reactant
putA
gene
product
putA_mRNA
RNA
BasR-phosphate
yrbL
yrbL_mRNA
Name:
yrbL -> yrbL_mRNA
Description:
Transcription of transcription unit yrbL. Reaction inhibition by BasR-phosphate.
Type:
transcription
Pathway Components:
yrbL - BasR-phosphate -> yrbL_mRNA
Components:
Function
Name
Type
inhibitor
BasR-phosphate
complex
reactant
yrbL
gene
product
yrbL_mRNA
RNA
csgDEFG_mRNA
CsgD
Name:
csgDEFG_mRNA -> CsgD
Description:
Translation of CsgD
Type:
translation
Pathway Components:
csgDEFG_mRNA -> CsgD
Components:
Function
Name
Type
product
CsgD
protein
reactant
csgDEFG_mRNA
RNA
csgDEFG_mRNA
CsgE
Name:
csgDEFG_mRNA -> CsgE
Description:
Translation of CsgE
Type:
translation
Pathway Components:
csgDEFG_mRNA -> CsgE
Components:
Function
Name
Type
product
CsgE
protein
reactant
csgDEFG_mRNA
RNA
CsgG + CsgE
CsgE-CsgG
Name:
CsgG + CsgE -> CsgE-CsgG
Description:
Reaction transforming CsgG, CsgE into CsgE-CsgG
Type:
state transition
Pathway Components:
CsgG + CsgE -> CsgE-CsgG
Components:
Function
Name
Type
reactant
CsgE
protein
product
CsgE-CsgG
complex
reactant
CsgG
protein
CsgE-CsgG
CsgA_Ext
CsgA
Name:
CsgA_Ext -> CsgA
Description:
Transport of CsgA_Ext through a bacterial membrane, leading to the presence of CsgA inside the cell.
Type:
transport
Pathway Components:
CsgA_Ext - CsgE-CsgG -> CsgA
Components:
Function
Name
Type
product
CsgA
simple_molecule
reactant
CsgA_Ext
simple_molecule
catalyzer
CsgE-CsgG
complex
csgDEFG_mRNA
CsgF
Name:
csgDEFG_mRNA -> CsgF
Description:
Translation of CsgF
Type:
translation
Pathway Components:
csgDEFG_mRNA -> CsgF
Components:
Function
Name
Type
product
CsgF
protein
reactant
csgDEFG_mRNA
RNA
csgDEFG_mRNA
CsgG
Name:
csgDEFG_mRNA -> CsgG
Description:
Translation of CsgG
Type:
translation
Pathway Components:
csgDEFG_mRNA -> CsgG
Components:
Function
Name
Type
product
CsgG
protein
reactant
csgDEFG_mRNA
RNA
dgkA_mRNA
DgkA
Name:
dgkA_mRNA -> DgkA
Description:
Translation of DgkA
Type:
translation
Pathway Components:
dgkA_mRNA -> DgkA
Components:
Function
Name
Type
product
DgkA
protein
reactant
dgkA_mRNA
RNA
D-1,2-diglyceride
DgkA
D-1,2-diglyceride
phosphatidate
Name:
D-1,2-diglyceride -> phosphatidate
Description:
Reaction transforming D-1,2-diglyceride into phosphatidate
Type:
state transition
Pathway Components:
D-1,2-diglyceride - DgkA - D-1,2-diglyceride -> phosphatidate
Components:
Function
Name
Type
inhibitor
D-1,2-diglyceride
simple_molecule
reactant
D-1,2-diglyceride
simple_molecule
catalyzer
DgkA
protein
product
phosphatidate
simple_molecule
qseBC_mRNA
QseB
Name:
qseBC_mRNA -> QseB
Description:
Translation of QseB
Type:
translation
Pathway Components:
qseBC_mRNA -> QseB
Components:
Function
Name
Type
product
QseB
protein
reactant
qseBC_mRNA
RNA
qseBC_mRNA
QseC
Name:
qseBC_mRNA -> QseC
Description:
Translation of QseC
Type:
translation
Pathway Components:
qseBC_mRNA -> QseC
Components:
Function
Name
Type
product
QseC
protein
reactant
qseBC_mRNA
RNA
qseBC_mRNA
YgiY
Name:
qseBC_mRNA -> YgiY
Description:
Translation of YgiY
Type:
translation
Pathway Components:
qseBC_mRNA -> YgiY
Components:
Function
Name
Type
product
YgiY
protein
reactant
qseBC_mRNA
RNA
yrbL_mRNA
YrbL
Name:
yrbL_mRNA -> YrbL
Description:
Translation of YrbL
Type:
translation
Pathway Components:
yrbL_mRNA -> YrbL
Components:
Function
Name
Type
product
YrbL
protein
reactant
yrbL_mRNA
RNA
putA_mRNA
PutA
Name:
putA_mRNA -> PutA
Description:
Translation of PutA
Type:
translation
Pathway Components:
putA_mRNA -> PutA
Components:
Function
Name
Type
product
PutA
protein
reactant
putA_mRNA
RNA
PutA
ubiquinone + proline
pyrroline 5-carboxylate + ubiquinol
Name:
ubiquinone + proline -> pyrroline 5-carboxylate + ubiquinol
Description:
Reaction transforming ubiquinone, proline into pyrroline 5-carboxylate, ubiquinol
Type:
state transition
Pathway Components:
ubiquinone + proline - PutA -> pyrroline 5-carboxylate + ubiquinol
Components:
Function
Name
Type
catalyzer
PutA
protein
reactant
proline
simple_molecule
product
pyrroline 5-carboxylate
simple_molecule
product
ubiquinol
simple_molecule
reactant
ubiquinone
simple_molecule
PutA
glutamate-semialdehyde
L-glutamate
Name:
glutamate-semialdehyde -> L-glutamate
Description:
Reaction transforming glutamate-semialdehyde into L-glutamate
Type:
state transition
Pathway Components:
glutamate-semialdehyde - PutA -> L-glutamate
Components:
Function
Name
Type
product
L-glutamate
simple_molecule
catalyzer
PutA
protein
reactant
glutamate-semialdehyde
simple_molecule
fimB_mRNA
FimB
Name:
fimB_mRNA -> FimB
Description:
Translation of FimB
Type:
translation
Pathway Components:
fimB_mRNA -> FimB
Components:
Function
Name
Type
product
FimB
protein
reactant
fimB_mRNA
RNA
tomB-hha_mRNA
TomB
Name:
tomB-hha_mRNA -> TomB
Description:
Translation of TomB
Type:
translation
Pathway Components:
tomB-hha_mRNA -> TomB
Components:
Function
Name
Type
product
TomB
protein
reactant
tomB-hha_mRNA
RNA
tomB-hha_mRNA
Hha
Name:
tomB-hha_mRNA -> Hha
Description:
Translation of Hha
Type:
translation
Pathway Components:
tomB-hha_mRNA -> Hha
Components:
Function
Name
Type
product
Hha
protein
reactant
tomB-hha_mRNA
RNA
cspI_mRNA
CspI
Name:
cspI_mRNA -> CspI
Description:
Translation of CspI
Type:
translation
Pathway Components:
cspI_mRNA -> CspI
Components:
Function
Name
Type
product
CspI
protein
reactant
cspI_mRNA
RNA
pyrroline 5-carboxylate
glutamate-semialdehyde
Name:
pyrroline 5-carboxylate -> glutamate-semialdehyde
Description:
Transformation of pyrroline 5-carboxylate into glutamate-semialdehyde by one or more reactions not shown.
Type:
complementary pathway reaction
Pathway Components:
pyrroline 5-carboxylate /
SPONTPRO-RXN /
glutamate-semialdehyde
Components:
Function
Name
Type
product
glutamate-semialdehyde
simple_molecule
reactant
pyrroline 5-carboxylate
simple_molecule