RegulonDB RegulonDB

AppY Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
HyaB AppC guanosine-diphosphate oxygen_Ext AppA AppC HyaC I(2,5)P2 AppB guanosine-triphosphate I(2,3,4,5)P4 ubiquinol_Ext I(1,2,3,4,5)P5 appCBXA HyaB ubiquinone HyaA HyaF phytate Ins2P hyaABCDEF HyaD AppY phosphate I(2,4,5)P3 AppX hyaABCDEF_mRNA HyaC HyaE HyaA AppB appCBXA_mRNA phosphate


Gensor Unit       
Name: AppY
Classification:
Groups: Posttranslational modification, protein turnover, chaperones
Energy production and conversion
Gene Ontology Terms (GO): biological_process GO:0019646 - aerobic electron transport chain
GO:0019645 - anaerobic electron transport chain
GO:0009061 - anaerobic respiration
GO:0006464 - cellular protein modification process
GO:0071454 - cellular response to anoxia
GO:0016036 - cellular response to phosphate starvation
Read more >
cellular_component GO:0044569 - [Ni-Fe] hydrogenase complex
GO:0009279 - cell outer membrane
GO:0070069 - cytochrome complex
GO:0005829 - cytosol
GO:0009375 - ferredoxin hydrogenase complex
GO:0016021 - integral component of membrane
GO:0005887 - integral component of plasma membrane
Read more >
molecular_function GO:0051538 - 3 iron, 4 sulfur cluster binding
GO:0051539 - 4 iron, 4 sulfur cluster binding
GO:0008707 - 4-phytase activity
GO:0003993 - acid phosphatase activity
GO:0004190 - aspartic-type endopeptidase activity
GO:0003824 - catalytic activity
GO:0009055 - electron transfer activity
Read more >
Components:
  Function Name Type
  protein AppA protein
  protein AppB protein
  protein AppC protein
  complex AppC-AppB complex
  protein AppX protein
  protein AppY protein
  protein HyaA protein
  complex HyaA-HyaB-HyaC complex
  protein HyaB protein
  protein HyaC protein
  protein HyaD protein
  protein HyaE protein
  protein HyaF protein
  simple_molecule I(1,2,3,4,5)P5 simple_molecule
  simple_molecule I(2,3,4,5)P4 simple_molecule
  simple_molecule I(2,4,5)P3 simple_molecule
  simple_molecule I(2,5)P2 simple_molecule
  simple_molecule Ins2P simple_molecule
  gene appCBXA gene
  RNA appCBXA_mRNA RNA
  simple_molecule guanosine-diphosphate simple_molecule
  simple_molecule guanosine-triphosphate simple_molecule
  gene hyaABCDEF gene
  RNA hyaABCDEF_mRNA RNA
  simple_molecule oxygen_Ext simple_molecule
  simple_molecule phosphate simple_molecule
  simple_molecule phytate simple_molecule
  simple_molecule ubiquinol_Ext simple_molecule
  simple_molecule ubiquinone simple_molecule


Reactions       
Showing 21 reactions
AppY appCBXA appCBXA_mRNA
Name: appCBXA -> appCBXA_mRNA
Description: Transcription of transcription unit appCBXA. Reaction activation by AppY.
Type: transcription
Pathway Components: appCBXA - AppY -> appCBXA_mRNA
Components:
Function Name Type
activator AppY protein
reactant appCBXA gene
product appCBXA_mRNA RNA
AppY hyaABCDEF hyaABCDEF_mRNA
Name: hyaABCDEF -> hyaABCDEF_mRNA
Description: Transcription of transcription unit hyaABCDEF. Reaction activation by AppY.
Type: transcription
Pathway Components: hyaABCDEF - AppY -> hyaABCDEF_mRNA
Components:
Function Name Type
activator AppY protein
reactant hyaABCDEF gene
product hyaABCDEF_mRNA RNA
appCBXA_mRNA AppC
Name: appCBXA_mRNA -> AppC
Description: Translation of AppC
Type: translation
Pathway Components: appCBXA_mRNA -> AppC
Components:
Function Name Type
product AppC protein
reactant appCBXA_mRNA RNA
AppC + AppB AppC-AppB
Name: AppC + AppB -> AppC-AppB
Description: Reaction transforming AppC, AppB into AppC-AppB
Type: state transition
Pathway Components: AppC + AppB -> AppC-AppB
Components:
Function Name Type
reactant AppB protein
reactant AppC protein
product AppC-AppB complex
AppC-AppB ubiquinol_Ext + oxygen_Ext ubiquinone
Name: ubiquinol_Ext + oxygen_Ext -> ubiquinone
Description: Transport of ubiquinol_Ext, oxygen_Ext through a bacterial membrane, leading to the presence of ubiquinone inside the cell.
Type: transport
Pathway Components: ubiquinol_Ext + oxygen_Ext - AppC-AppB -> ubiquinone
Components:
Function Name Type
catalyzer AppC-AppB complex
reactant oxygen_Ext simple_molecule
reactant ubiquinol_Ext simple_molecule
product ubiquinone simple_molecule
appCBXA_mRNA AppB
Name: appCBXA_mRNA -> AppB
Description: Translation of AppB
Type: translation
Pathway Components: appCBXA_mRNA -> AppB
Components:
Function Name Type
product AppB protein
reactant appCBXA_mRNA RNA
appCBXA_mRNA AppX
Name: appCBXA_mRNA -> AppX
Description: Translation of AppX
Type: translation
Pathway Components: appCBXA_mRNA -> AppX
Components:
Function Name Type
product AppX protein
reactant appCBXA_mRNA RNA
appCBXA_mRNA AppA
Name: appCBXA_mRNA -> AppA
Description: Translation of AppA
Type: translation
Pathway Components: appCBXA_mRNA -> AppA
Components:
Function Name Type
product AppA protein
reactant appCBXA_mRNA RNA
AppA guanosine-diphosphate guanosine-triphosphate guanosine-diphosphate + phosphate
Name: guanosine-triphosphate -> guanosine-diphosphate + phosphate
Description: Reaction transforming guanosine-triphosphate into guanosine-diphosphate, phosphate
Type: state transition
Pathway Components: guanosine-triphosphate - AppA - guanosine-diphosphate -> guanosine-diphosphate + phosphate
Components:
Function Name Type
catalyzer AppA protein
inhibitor guanosine-diphosphate simple_molecule
product guanosine-diphosphate simple_molecule
reactant guanosine-triphosphate simple_molecule
product phosphate simple_molecule
AppA phytate I(1,2,3,4,5)P5 + phosphate
Name: phytate -> I(1,2,3,4,5)P5 + phosphate
Description: Reaction transforming phytate into I(1,2,3,4,5)P5, phosphate
Type: state transition
Pathway Components: phytate - AppA -> I(1,2,3,4,5)P5 + phosphate
Components:
Function Name Type
catalyzer AppA protein
product I(1,2,3,4,5)P5 simple_molecule
product phosphate simple_molecule
reactant phytate simple_molecule
AppA I(1,2,3,4,5)P5 I(2,3,4,5)P4 + phosphate
Name: I(1,2,3,4,5)P5 -> I(2,3,4,5)P4 + phosphate
Description: Reaction transforming I(1,2,3,4,5)P5 into I(2,3,4,5)P4, phosphate
Type: state transition
Pathway Components: I(1,2,3,4,5)P5 - AppA -> I(2,3,4,5)P4 + phosphate
Components:
Function Name Type
catalyzer AppA protein
reactant I(1,2,3,4,5)P5 simple_molecule
product I(2,3,4,5)P4 simple_molecule
product phosphate simple_molecule
AppA I(2,3,4,5)P4 I(2,4,5)P3 + phosphate
Name: I(2,3,4,5)P4 -> I(2,4,5)P3 + phosphate
Description: Reaction transforming I(2,3,4,5)P4 into I(2,4,5)P3, phosphate
Type: state transition
Pathway Components: I(2,3,4,5)P4 - AppA -> I(2,4,5)P3 + phosphate
Components:
Function Name Type
catalyzer AppA protein
reactant I(2,3,4,5)P4 simple_molecule
product I(2,4,5)P3 simple_molecule
product phosphate simple_molecule
AppA I(2,4,5)P3 phosphate + I(2,5)P2
Name: I(2,4,5)P3 -> phosphate + I(2,5)P2
Description: Reaction transforming I(2,4,5)P3 into phosphate, I(2,5)P2
Type: state transition
Pathway Components: I(2,4,5)P3 - AppA -> phosphate + I(2,5)P2
Components:
Function Name Type
catalyzer AppA protein
reactant I(2,4,5)P3 simple_molecule
product I(2,5)P2 simple_molecule
product phosphate simple_molecule
AppA I(2,5)P2 phosphate + Ins2P
Name: I(2,5)P2 -> phosphate + Ins2P
Description: Reaction transforming I(2,5)P2 into phosphate, Ins2P
Type: state transition
Pathway Components: I(2,5)P2 - AppA -> phosphate + Ins2P
Components:
Function Name Type
catalyzer AppA protein
reactant I(2,5)P2 simple_molecule
product Ins2P simple_molecule
product phosphate simple_molecule
hyaABCDEF_mRNA HyaA
Name: hyaABCDEF_mRNA -> HyaA
Description: Translation of HyaA
Type: translation
Pathway Components: hyaABCDEF_mRNA -> HyaA
Components:
Function Name Type
product HyaA protein
reactant hyaABCDEF_mRNA RNA
HyaC + HyaB + HyaA HyaA-HyaB-HyaC
Name: HyaC + HyaB + HyaA -> HyaA-HyaB-HyaC
Description: Reaction transforming HyaC, HyaB, HyaA into HyaA-HyaB-HyaC
Type: state transition
Pathway Components: HyaC + HyaB + HyaA -> HyaA-HyaB-HyaC
Components:
Function Name Type
reactant HyaA protein
product HyaA-HyaB-HyaC complex
reactant HyaB protein
reactant HyaC protein
hyaABCDEF_mRNA HyaB
Name: hyaABCDEF_mRNA -> HyaB
Description: Translation of HyaB
Type: translation
Pathway Components: hyaABCDEF_mRNA -> HyaB
Components:
Function Name Type
product HyaB protein
reactant hyaABCDEF_mRNA RNA
hyaABCDEF_mRNA HyaC
Name: hyaABCDEF_mRNA -> HyaC
Description: Translation of HyaC
Type: translation
Pathway Components: hyaABCDEF_mRNA -> HyaC
Components:
Function Name Type
product HyaC protein
reactant hyaABCDEF_mRNA RNA
hyaABCDEF_mRNA HyaD
Name: hyaABCDEF_mRNA -> HyaD
Description: Translation of HyaD
Type: translation
Pathway Components: hyaABCDEF_mRNA -> HyaD
Components:
Function Name Type
product HyaD protein
reactant hyaABCDEF_mRNA RNA
hyaABCDEF_mRNA HyaE
Name: hyaABCDEF_mRNA -> HyaE
Description: Translation of HyaE
Type: translation
Pathway Components: hyaABCDEF_mRNA -> HyaE
Components:
Function Name Type
product HyaE protein
reactant hyaABCDEF_mRNA RNA
hyaABCDEF_mRNA HyaF
Name: hyaABCDEF_mRNA -> HyaF
Description: Translation of HyaF
Type: translation
Pathway Components: hyaABCDEF_mRNA -> HyaF
Components:
Function Name Type
product HyaF protein
reactant hyaABCDEF_mRNA RNA



RegulonDB