RegulonDB RegulonDB 10.9: Downloadable High-throughput datasets

Downloadable High-throughput datasets

Our curation is focused on identifying the objects (sites, promoters, interactions) that satisfy a set of criteria regarding confidence and interpretability, in order to upload them in RegulonDB together with all existing knowledge. When these criteria are not satisfied, then we simply offer the data as datasets. This page contains the catalog of the HT datasets.

  ID Type Name|Title Evidence Method Reference
  HTRI00000009 TF RNA-seq-OmpR-28526842 RNA-seq nd 28526842
  HTRI00000335 TF gSELEX-OmpR-26332955 gSELEX nd 26332955
  HTRI00000336 TF GEA-OmpR-26332955 GEA nd 26332955
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 MEME Suite 4.10.1 nd 28061857
  HTRI00000380 TF gSELEX, AIBSCS-OmpR-26332955 gSELEX, AIBSCS nd 26332955
  HTRI00000381 TF MEME Suite 4.10.1-OmpR-28061857 ChIP-seq nd 28061857
  HTRI00000832 TF ChIP-exo|RSATompR.all.regulon28526842 ChIP-exo|RSAT nd 28526842