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Name: | araC | |||||||||
Synonym(s): | OP00004 | |||||||||
Gene(s): | araC Genome Browser M3D Gene expression COLOMBOS | |||||||||
Reference(s): |
[1] Lee NL., et al., 1981 [2] Miyada CG., et al., 1984 |
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Promoter | ||||||||||
Name: | araCp | |||||||||
+1: | 70223 | |||||||||
Sigma Factor: | Sigma70 Sigmulon | |||||||||
Distance from start of the gene: | 164 | |||||||||
Sequence: |
tgacgccgtgcaaataatcaatgtggacttttctgccgtgattatagacacttttgttacGcgtttttgtcatggctttgg -35 -10 +1 |
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Evidence: |
[HIPP] [IHBCE] [TIM] |
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Reference(s): |
[3] Hamilton EP., et al., 1988 [4] Wallace RG., et al., 1980 |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
remote | AraC-α-L-arabinopyranose | activator | araCp | 70110 | 70126 | -105.0 | ataaaaagcgTCAGGTAGGATCCGCTAatcttatgga | nd | [GEA], [APIORCISFBSCS], [BPP], [SM] | [5], [6], [7] |
proximal | AraC-α-L-arabinopyranose | activator | araCp | 70131 | 70147 | -84.0 | ccgctaatctTATGGATAAAAATGCTAtggcatagca | nd | [GEA], [APIORCISFBSCS], [BPP], [SM] | [6], [7] |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
proximal | AraC | repressor | araCp | 70131 | 70147 | -84.0 | ccgctaatctTATGGATAAAAATGCTAtggcatagca | nd | [GEA], [APIORCISFBSCS], [BPP], [SM] | [6], [7] |
proximal | AraC-α-L-arabinopyranose | repressor | araCp | 70184 | 70200 | -31.0 | aaataatcaaTGTGGACTTTTCTGCCGtgattataga | nd | [GEA], [APIORCISFBSCS], [BCE], [SM] | [9] |
proximal | AraC-α-L-arabinopyranose | repressor | araCp | 70205 | 70221 | -10.0 | ctgccgtgatTATAGACACTTTTGTTAcgcgtttttg | nd | [GEA], [APIORCISFBSCS], [BCE], [SM] | [9], [11] |
remote | AraC | repressor | araCp | 70342 | 70358 | 128.0 | tctgatgcaaTATGGACAATTGGTTTCttctctgaat | nd | [APIORCISFBSCS], [BCE], [BPP], [SM] | nd |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
proximal | CRP-cyclic-AMP | activator | araCp | 70158 | 70179 | -54.5 | tggcatagcaAAGTGTGACGCCGTGCAAATAAtcaatgtgga | nd | [GEA], [APIORCISFBSCS], [BPP], [SM] | [8] |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
proximal | XylR-α-D-xylopyranose | repressor | araCp | 70195 | 70213 | -19.5 | gtggacttttCTGCCGTGATTATAGACACttttgttacg | nd | [GEA], [AIBSCS], [BPP] | [10] |
proximal | XylR-α-D-xylopyranose | repressor | araCp | 70216 | 70234 | 2.5 | atagacacttTTGTTACGCGTTTTTGTCAtggctttggt | nd | [GEA], [AIBSCS], [BPP] | [10] |
Reference(s) |
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