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|
| Operon |  |
|---|---|
| Name: | deoR |
| This page displays every known transcription unit of this operon and their known regulation. | |
| Name: | deoR |
| Gene(s): | deoR Genome Browser M3D Gene expression COLOMBOS |
| Evidence: | [COMP-AINF] Inferred computationally without human oversight [EXP-IDA-BOUNDARIES-DEFINED] Boundaries of transcription experimentally identified |
| Reference(s): | [1] Zaslaver A., et al., 2006 |
| Promoter | |
| Name: | deoRp |
| +1: | Unknown |
| Note(s): | Zaslaver et al. demonstrated in 2006, by means of a library of fluorescent transcription fusions, that this promoter can be transcribed in vitro Zaslaver A,2006. Based on this, a putative promoter was suggested, but the +1 site of the transcription initiation has not been determined, although there exists promoter activity. |
| Evidence: | [EXP-IEP] |
| Reference(s): | [1] Zaslaver A., et al., 2006 |
| RNA cis-regulatory element | |
|---|
| Regulation, transcriptional elongation | |
| Attenuator type: | Translational |
| Strand: | reverse |
| Structure type | Energy | LeftPos | RightPos | Sequence (RNA-strand) | |
|---|---|---|---|---|---|
| terminator | -8.9 | 882746 | 882776 | gctaaaaagtGTAGTATTGAGCGGCTCGCTTCAATAACTAttcagaggga |
| Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos" |
[EXP-IEP] Inferred from expression pattern