RegulonDB RegulonDB 10.9: Operon Form
   

galR operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: galR
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit          
Name: galR
Gene(s): galR   Genome Browser M3D Gene expression COLOMBOS
Note(s): Based on in vitro transcription, it was demonstrated that the putative cAMP-CRP-binding site in the galRp promoter region Weickert MJ,1993 is not functional in the purified system Semsey S,2007
Reference(s): [1] Weickert MJ., et al., 1993
Promoter
Name: galRp
+1: 2976569
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 30
Sequence: tcccacgatgaaaacacgccaccccttgaaccaacgggcgttttccgtaacactgaaagaAtgtaagcgtttacccactaa
                          -35                    -10        +1                   
Evidence: [HIPP]
[ICWHO]
[RS-EPT-CBR]
[TIM]
Reference(s): [2] Huerta AM., et al., 2003
[3] Salgado H, et al., 2012
[1] Weickert MJ., et al., 1993
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal GalR-β-D-galactose repressor galRp 2976569 2976584 8.5 cactgaaagaATGTAAGCGTTTACCCActaaggtatt nd [APIORCISFBSCS], [BPP], [GEA] [1], [4]
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal GalS-β-D-galactose repressor galRp 2976569 2976584 8.5 cactgaaagaATGTAAGCGTTTACCCActaaggtatt nd [APIORCISFBSCS], [BPP], [GEA] [4]





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