RegulonDB RegulonDB 10.8: Operon Form
   

cynR operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: cynR
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit          
Name: cynR
Synonym(s): OP00194
Gene(s): cynR   Genome Browser M3D Gene expression COLOMBOS
Reference(s): [1] Anderson PM., et al., 1990
Promoter
Name: cynRp
+1: 358709
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 19
Sequence: aggcagactactcgccgattgtcataaggtaaaagtctcatttatgatgagttccattggAtttacttataggttgcgaat
                             -35                       -10  +1                   
Note(s): This promoter topologically overlaps the cynTSX promoter on the complementary strand.
Evidence: [HIPP]
[TIM]
Reference(s): [2] Lamblin AF., et al., 1993
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal CynR repressor cynRp 358700 358708 6.0 ttccattggaTTTACTTATaggttgcgaa nd [APIORCISFBSCS], [BPP] [3]
proximal CynR repressor cynRp 358738 358746 -33.0 gccgattgtcATAAGGTAAaagtctcatt nd [APIORCISFBSCS], [BPP] [3]





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