RegulonDB RegulonDB 11.1: Operon Form

cynR operon and associated TUs in Escherichia coli K-12 genome

Name: cynR
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit          
Name: cynR
Synonym(s): OP00194
Gene(s): cynR   Genome Browser M3D Gene expression COLOMBOS
Reference(s): [1] Anderson PM., et al., 1990
Name: cynRp
+1: 358709
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 19
Sequence: aggcagactactcgccgattgtcataaggtaaaagtctcatttatgatgagttccattggAtttacttataggttgcgaat
                                  -35                       +10                  
Evidence: [COMP-AINF]
Reference(s): [2] Huerta AM., et al., 2003
[3] Lamblin AF., et al., 1993
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence Confidence level (C: Confirmed, S: Strong, W: Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal CynR repressor cynRp 358700 358708 6.0 ttccattggaTTTACTTATaggttgcgaa nd [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] nd [4]
proximal CynR repressor cynRp 358738 358746 -33.0 gccgattgtcATAAGGTAAaagtctcatt nd [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] nd [4]