RegulonDB RegulonDB 10.8: Operon Form
   

hpt operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: hpt
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit          
Name: hpt
Gene(s): hpt   Genome Browser M3D Gene expression COLOMBOS
Promoter
Name: hptp
+1: 141360
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 71
Sequence: acaattcgagctttattaacagattccgcgaatgaatagttttactggtatactgcgtgtCttgcgctttgttgcggtgcc
                        -35                      -10        +1                   
Evidence: [CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[HIPP]
[RS-EPT-CBR]
[TIM]
Reference(s): [1] Izu H., et al., 2002
[2] Salgado H, et al., 2012
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal CRP-cAMP activator hptp 141284 141305 -65.5 aggttttaacATGTGTGATCGTCATCACAATTcgagctttat nd [APIORCISFBSCS], [BPP], [CV(CHIP-SV/GEA/ROMA)], [CV(CHIP-SV/SM)], [CV(GEA/ROMA)], [CV(GEA/ROMA/SM)], [GEA], [SM] [1]
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal IHF repressor hptp 141330 141342 -24.0 agattccgcgAATGAATAGTTTTactggtatac nd [APIORCISFBSCS], [CV(CHIP-SV/GEA/ROMA)], [CV(CHIP-SV/SM)], [CV(GEA/ROMA)], [CV(GEA/ROMA/SM)], [GEA], [SM] [1]





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