RegulonDB RegulonDB 10.10: Operon Form
   

fhuE operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: fhuE
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit          
Name: fhuE
Gene(s): fhuE   Genome Browser M3D Gene expression COLOMBOS
Note(s): The transcription of the fhuE gene is induced during the first 24 h after the induction of nitrogen starvation Switzer A, Burchell L, McQuail J, Wigneshweraraj S,2020.
Evidence: [BTEI] Boundaries of transcription experimentally identified
Reference(s): [1] Sauer M., et al., 1990
Promoter
Name: fhuEp
+1: 1161647
Distance from start of the gene: 96
Sequence: gctgaaaagacattctctgtttggtttacatgacaaatatgaatgcgtatatttctcattTgcatttacaaacaaaattat
Evidence: [HIPP]
Reference(s): [1] Sauer M., et al., 1990
Terminator(s)
Type: rho-independent
Sequence: tggggagactAAGGCAGCCAGATGGCTGCCTTttttacaggt
Reference(s): [1] Sauer M., et al., 1990
TF binding sites (TFBSs)
[Fur,-] Phrase
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal Fur-Fe2+ repressor fhuEp 1161624 1161642 15.0 tcatttgcatTTACAAACAAAATTATTCGcacactaaat nd [APIORCISFBSCS] [1]
proximal Fur-Fe2+ repressor fhuEp 1161648 1161666 -10.0 gacaaatatgAATGCGTATATTTCTCATTtgcatttaca nd [AIBSCS] nd


Evidence    

 [HIPP] Human inference of promoter position

 [APIORCISFBSCS] A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.

 [AIBSCS] Automated inference based on similarity to consensus sequences


Reference(s)    

 [1] Sauer M., Hantke K., Braun V., 1990, Sequence of the fhuE outer-membrane receptor gene of Escherichia coli K12 and properties of mutants., Mol Microbiol 4(3):427-37

RegulonDB