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Name: | trxC | |||||||||
Gene(s): | trxC Genome Browser M3D Gene expression COLOMBOS | |||||||||
Note(s): | The transcription of the gene trxC is enhanced under high oxygen saturation (300%) in the absence of the superoxide dismutase proteins SodA and SodB Baez A,2013 Sulfane sulfur modifies OxyR at Cys199 to form a protein persulfide that in turn activates the expression of grxA, trxC, and katG promoters under both aerobic and anaerobic conditions Hou N, Yan Z, Fan K, Li H, Zhao R, Xia Y, Xun L, Liu H,2019 |
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Evidence: | [ICWHO] Inferred computationally without human oversight | |||||||||
Promoter | ||||||||||
Name: | trxCp | |||||||||
+1: | 2718675 | |||||||||
Sigma Factor: | Sigma70 Sigmulon | |||||||||
Distance from start of the gene: | 60 | |||||||||
Sequence: |
atcatacctattgaataaaacagattgttgtctggaacaatgtccccgataatatgtaacAtattagaaacataccggcgt -35 -10 +1 |
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Evidence: |
[HIPP] [ICWHO] [TIM] |
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Reference(s): |
[1] Huerta AM., et al., 2003 [2] Ritz D., et al., 2000 |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
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LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
proximal | OxyR | activator | trxCp | 2718610 | 2718626 | -57.0 | ccaaagcctgCGACTATCATACCTATTgaataaaaca | [GEA], [RSE], [APIORCISFBSCS], [BPP], [CEEUMA], [IHBCE] | [2], [3] | |
proximal | OxyR | activator | trxCp | 2718632 | 2718648 | -35.0 | ctattgaataAAACAGATTGTTGTCTGgaacaatgtc | [GEA], [APIORCISFBSCS], [BPP] | [2] |
Reference(s) |
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