RegulonDB RegulonDB 10.10: Operon Form

argU operon and associated TUs in Escherichia coli K-12 genome

Name: argU
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit          
Name: argU
Synonym(s): dnaV
Gene(s): argU   Genome Browser M3D Gene expression COLOMBOS
Evidence: [BTEI] Boundaries of transcription experimentally identified
Name: argUp
+1: 564703
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 20
Sequence: cagcaaccagatcaaaagccattgactcagcaagggttgaccgtataattcacgcgattaCaccgcattgcggtatcaacg
                      -35                   -10             +1                   
Evidence: [HIPP]
Reference(s): [1] Huerta AM., et al., 2003
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal Fis activator argUp 564631 564645 -65.0 cagacgcggtCGTTCACTTGTTCAGcaaccagatc nd [IHBCE] nd

RNA cis-regulatory element    
Regulation, transcriptional elongation  
Attenuator type: Translational
Strand: forward
  Structure type Energy LeftPos RightPos Sequence (RNA-strand)
  terminator -10.6 564695 564725 tataattcacGCGATTACACCGCATTGCGGTATCAACGCGcccttagctc
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos"