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|
| Operon |  |
|---|---|
| Name: | valVW |
| This page displays every known transcription unit of this operon and their known regulation. | |
| Name: | valVW |
| Synonym(s): | valV |
| Gene(s): | valV, valW Genome Browser M3D Gene expression COLOMBOS |
| Note(s): | It is very probable that both valVW and leuQPV operons terminate in a Rho-dependent fashion, since the downstream sequences do not contain any recognizable Rho-independent transcription terminator structures Mohanty BK,2007. |
| Evidence: | [BTEI] Boundaries of transcription experimentally identified [LTED] Length of transcript experimentally determined |
| Reference(s): | [1] Mohanty BK., et al., 2007 |
| Promoter | |
| Name: | valVp |
| +1: | 1746415 |
| Sigma Factor: | Sigma70 Sigmulon |
| Distance from start of the gene: | 20 |
| Sequence: |
agcgcagaaaattacgttttgcctcttgccaccttcccactctgccgctaatattcgtccCcgttgtcacctacaacgttg -35 -10 +1 |
| Evidence: |
[HIPP] [TIM] |
| Reference(s): | [1] Mohanty BK., et al., 2007 |
| RNA cis-regulatory element | |
|---|
| Regulation, transcriptional elongation | |
| Attenuator type: | Translational |
| Strand: | forward |
| Structure type | Energy | LeftPos | RightPos | Sequence (RNA-strand) | |
|---|---|---|---|---|---|
| terminator | -11.7 | 1746475 | 1746517 | cttgacatggTGGGGGTCGTTGGTTCGAGTCCAATTGAACGCACCATCCTGCgtccgtagct |
| Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos" |
[HIPP] Human inference of promoter position