RegulonDB RegulonDB 10.10: Operon Form

serT operon and associated TUs in Escherichia coli K-12 genome

Name: serT
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit          
Name: serT
Gene(s): serT   Genome Browser M3D Gene expression COLOMBOS
Evidence: [BTEI] Boundaries of transcription experimentally identified
Name: serTp
+1: 1031719
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 7
Sequence: tttcaggcaaacaaacaaattaggggtttacacgccgcatcgggatgtttatagtgcgcgTcattccggaagtgtggccga
                                                  -10       +1                   
Evidence: [HIPP]
Reference(s): [1] Maciag A., et al., 2011
Type: rho-independent
Sequence: ggtcattaagCAAATATAACGCCCTGAGAATTTCgacaggcaaa
Reference(s): [2] Fournier MJ., et al., 1985
[3] Tamura F., et al., 1984
Type: rho-independent
Sequence: gcaaaagaaaAAGGGGTTAGCATTTAGCTAACCCCTTAtcttatttgg
Reference(s): [2] Fournier MJ., et al., 1985
[4] Peters JM., et al., 2009
[3] Tamura F., et al., 1984
[5] Zuker M. 2003
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal Fis activator serTp 1031772 1031786 -60.0 atgcacttttGGCTGTTTTTCAGGCaaacaaacaa nd [IHBCE] nd