RegulonDB RegulonDB 10.9: Operon Form
   

putA operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: putA
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit          
Name: putA
Gene(s): putA   Genome Browser M3D Gene expression COLOMBOS
Reference(s): [1] Nakao T., et al., 1987
Promoter
Name: putAp
+1: 1078925
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 43
Sequence: ttgctacgcatgtcacatttaacatggttgcacaaagttgcaacatcatggatatttcacGataacgttaagttgcacctt
                            -35                    -10      +1                   
Evidence: [HIPP]
[ICWHO]
[TIM]
Reference(s): [2] Huerta AM., et al., 2003
[1] Nakao T., et al., 1987
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal BasR-Phosphorylated repressor putAp 1078914 1078933 2.5 aacatcatggATATTTCACGATAACGTTAAGttgcaccttt nd [APIORCISFBSCS], [BPP] [6]
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
nd MarA activator putAp nd nd nd nd nd [BPP], [GEA], [IGI] [7]
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal PutA repressor putAp 1078909 1078914 14.5 gataacgttaAGTTGCAcctttctgaa nd [BPP], [GEA], [SM] [5]
proximal PutA repressor putAp 1078944 1078949 -21.5 ggttgcacaaAGTTGCAacatcatgga nd [BPP], [GEA], [SM] [5]
proximal PutA repressor putAp 1078954 1078959 -31.5 catttaacatGGTTGCAcaaagttgca nd [BPP], [GEA], [SM] [3], [4], [5]





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