RegulonDB RegulonDB 10.8: Operon Form
   

rpoZ-spoT-trmH-recG operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: rpoZ-spoT-trmH-recG
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit       
Name: rpoZ-spoT-trmH-recG
Synonym(s): rpoZ-spoTU-recG
Gene(s): rpoZ, spoT, trmH, recG   Genome Browser M3D Gene expression COLOMBOS
Reference(s): [1] Kalman M., et al., 1992
Promoter
Name: rpoZp
+1: 3822077
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 29
Sequence: atgacgctttaatcagcaaattgttggcagactgaacctgatttcagtatcatgcccagtCatttcttcacctgtggagct
                        -35                     -10         +1                   
Evidence: [RS-EPT-CBR]
[TAS]
Reference(s): [2] Gentry D., et al., 1993
[3] Salgado H, et al., 2012
Allosteric regulation of RNA-polymerase
  Regulator Function Promoter target of RNApol Growth Conditions Note Evidence Reference
  DksA-ppGpp inhibition rpoZp Together ppGpp and DksA can inhibit more strongly the transcription initiation from the ribosomal protein promoter in vitro and in vivo Lemke JJ,2011 [APPH]
[GEA]
[IMP]
[4]
Evidence: [APPH] Assay of protein purified to homogeneity
[GEA] Gene expression analysis
[IMP] Inferred from mutant phenotype
Reference(s): [4] Lemke JJ., et al., 2011


Transcription unit       
Name: recG
Gene(s): recG   Genome Browser M3D Gene expression COLOMBOS
Evidence: [ITC] Inferred through co-regulation
Reference(s): [5] Avison MB., et al., 2001





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