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| Operon |  |
|---|---|
| Name: | secE-nusG |
| This page displays every known transcription unit of this operon and their known regulation. | |
| Name: | secE-nusG |
| Gene(s): | secE, nusG Genome Browser M3D Gene expression COLOMBOS |
| Evidence: | [EXP-IDA-BOUNDARIES-DEFINED] Boundaries of transcription experimentally identified |
| Reference(s): | [1] Downing WL., et al., 1990 |
| Promoter | |
| Name: | secEp |
| +1: | 4177177 |
| Distance from start of the gene: | 181 |
| Sequence: |
gttctgagctaattgccgataacatttgacgcaatgcgcactaaaagggcatcatttgatGccctttttgcacgctttcgt |
| Evidence: | [EXP-IDA-TRANSCRIPTION-INIT-MAPPING] |
| Reference(s): | [1] Downing WL., et al., 1990 |
| Terminator(s) | |
| Type: | rho-independent |
| Sequence: | cgttgcacaaGGCGTGAGATTGGAATACAATTTCGCGCCttttgttttt |
| Reference(s): | [1] Downing WL., et al., 1990 |
| RNA cis-regulatory element | |
|---|
| Regulation, transcriptional elongation | |
| Attenuator type: | Transcriptional |
| Strand: | forward |
| Structure type | Energy | LeftPos | RightPos | Sequence (RNA-strand) | |
|---|---|---|---|---|---|
| terminator | -11.8 | 4177163 | 4177186 | gcactaaaagGGCATCATTTGATGCCCTTTTTGcacgctttcg | |
| anti-terminator | -5.39 | 4177130 | 4177167 | tgagctaattGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCAtcatttgatg | |
| anti-anti-terminator | -10.5 | 4177104 | 4177152 | tggcgcgggcGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGcgcactaaaa |
| Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos" |
| Reference(s) |
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|---|---|
[EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Transcription initiation mapping