RegulonDB RegulonDB 11.2: Operon Form

secE-nusG operon and associated TUs in Escherichia coli K-12 genome

Name: secE-nusG
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit       
Name: secE-nusG
Gene(s): secE, nusG   Genome Browser M3D Gene expression COLOMBOS
Evidence: [EXP-IDA-BOUNDARIES-DEFINED] Boundaries of transcription experimentally identified
Reference(s): [1] Downing WL., et al., 1990
Name: secEp
+1: 4177177
Distance from start of the gene: 181
Sequence: gttctgagctaattgccgataacatttgacgcaatgcgcactaaaagggcatcatttgatGccctttttgcacgctttcgt
Reference(s): [1] Downing WL., et al., 1990
Type: rho-independent
Reference(s): [1] Downing WL., et al., 1990

RNA cis-regulatory element    
Regulation, transcriptional elongation  
Attenuator type: Transcriptional
Strand: forward
  Structure type Energy LeftPos RightPos Sequence (RNA-strand)
  terminator -11.8 4177163 4177186 gcactaaaagGGCATCATTTGATGCCCTTTTTGcacgctttcg
  anti-terminator -5.39 4177130 4177167 tgagctaattGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCAtcatttgatg
  anti-anti-terminator -10.5 4177104 4177152 tggcgcgggcGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGcgcactaaaa
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos"