RegulonDB RegulonDB 10.8: Operon Form
   

clpA operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: clpA
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit       
Name: clpA
Gene(s): clpA   Genome Browser M3D Gene expression COLOMBOS
Note(s): Downstream from the termination of translation, this operon has a stable 14-bp stem and 4-bp loop, consistent with a transcription termination signal Gottesman S,1990.
Evidence: [BTEI] Boundaries of transcription experimentally identified
Reference(s): [1] Gottesman S., et al., 1990
Promoter
Name: clpAp1
+1: 923080
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 184
Sequence: ttacactccgatggagtttgttattgacgtgttacaaaaattcttttcttatgatgtagaAcgtgcaacgcaattgatgct
                        -35                       -10       +1                   
Evidence: [HIPP]
[TIM]
Reference(s): [1] Gottesman S., et al., 1990


Transcription unit       
Name: clpA
Gene(s): clpA   Genome Browser M3D Gene expression COLOMBOS
Note(s): Downstream from the termination of translation, this operon has a stable 14-bp stem and 4-bp loop, consistent with a transcription termination signal Gottesman S,1990.
Evidence: [BTEI] Boundaries of transcription experimentally identified
Reference(s): [1] Gottesman S., et al., 1990
Promoter
Name: clpAp2
+1: 923092
Distance from start of the gene: 172
Sequence: ggagtttgttattgacgtgttacaaaaattcttttcttatgatgtagaacgtgcaacgcaAttgatgctcgctgttcacta
Evidence: [TIM]
Reference(s): [1] Gottesman S., et al., 1990


Transcription unit       
Name: clpA
Gene(s): clpA   Genome Browser M3D Gene expression COLOMBOS
Note(s): Downstream from the termination of translation, this operon has a stable 14-bp stem and 4-bp loop, consistent with a transcription termination signal Gottesman S,1990.
Evidence: [BTEI] Boundaries of transcription experimentally identified
Reference(s): [1] Gottesman S., et al., 1990
Promoter
Name: clpAp3
+1: 923210
Distance from start of the gene: 54
Sequence: gttgcagaaaccaaagtggcgatggtgaacaagtacgcgagggagaatgagcatccattgCtgtgtacgctagaaaaagcc
Evidence: [TIM]
Reference(s): [1] Gottesman S., et al., 1990





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