![]() ![]() ![]() ![]() |
Name: | tonB | |||||||||
Synonym(s): | OP00228 | |||||||||
Gene(s): | tonB Genome Browser M3D Gene expression COLOMBOS | |||||||||
Note(s): | Expression of tonB, along with that of other genes also regulated by Fur, is reduced under Zn excess Xu Z,2019. | |||||||||
Evidence: | [BTEI] Boundaries of transcription experimentally identified [LTED] Length of transcript experimentally determined |
|||||||||
Reference(s): |
[1] Postle K., et al., 1983 [2] Young GM., et al., 1994 |
|||||||||
Promoter | ||||||||||
Name: | tonBp | |||||||||
+1: | 1311054 | |||||||||
Sigma Factor: | Sigma70 Sigmulon | |||||||||
Distance from start of the gene: | 35 | |||||||||
Sequence: |
ttcactgatcctgatcgtcttgccttattgaatatgattgctatttgcatttaaaatcgaGacctggtttttctactgaaa -35 -10 +1 |
|||||||||
Evidence: |
[ICWHO] [TIM] |
|||||||||
Reference(s): |
[3] Huerta AM., et al., 2003 [4] Lisser S., et al., 1993 [1] Postle K., et al., 1983 |
|||||||||
Terminator(s) | ||||||||||
Type: | rho-independent | |||||||||
Sequence: | gtaagcagaaAGTCAAAAGCCTCCGACCGGAGGCTTTTGACTattactcaac | |||||||||
Reference(s): | [1] Postle K., et al., 1983 |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
proximal | Fur-Fe2+ | activator | tonBp | 1311020 | 1311038 | -25.0 | gtcttgccttATTGAATATGATTGCTATTtgcatttaaa | nd | [AIBSCS], [APIORCISFBSCS], [BPP] | [5] |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
proximal | Fur-Fe2+ | repressor | tonBp | 1311026 | 1311044 | -19.0 | ccttattgaaTATGATTGCTATTTGCATTtaaaatcgag | nd | [APIORCISFBSCS], [BCE], [BPP] | [5] |
proximal | Fur-Fe2+ | repressor | tonBp | 1311030 | 1311048 | -15.0 | attgaatatgATTGCTATTTGCATTTAAAatcgagacct | nd | [APIORCISFBSCS], [BPP] | [5] |
proximal | Fur-Fe2+ | repressor | tonBp | 1311070 | 1311088 | 26.0 | gtttttctacTGAAATGATTATGACTTCAatgacccttg | nd | [BCE] | nd |
Reference(s) |
![]() |
---|---|