RegulonDB RegulonDB 10.9: Operon Form
   

moeAB operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: moeAB
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit          
Name: moeAB
Gene(s): moeB, moeA   Genome Browser M3D Gene expression COLOMBOS
Promoter
Name: moeAp
+1: 866394
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 30
Sequence: acccagcgctacgcccgaggtggcatacagtctgtggcgtttttctgacataataggcaaAttcgattttgcctccgcagg
                         -35                     -10        +1                   
Evidence: [ICWHO]
[RS-EPT-CBR]
[TIM]
Reference(s): [1] Hasona A., et al., 2001
[2] Huerta AM., et al., 2003
[3] Salgado H, et al., 2012
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
remote ArcA-Phosphorylated activator moeAp 866524 866538 -137.0 gtggttcgccACTTTTGCTATAAATAtcagaatttt nd [BPP], [GEA] [1]
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
remote FNR repressor moeAp 866354 866367 34.5 gcaggagtgtTTTCATGGAATTTACcaccggattg nd [BPP], [GEA] [1]
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
remote NarL-Phosphorylated activator moeAp 866500 866506 -109.0 tttttatgaaTTACTCATtcaatttttg nd [AIBSCS], [GEA] [1]
remote NarL-Phosphorylated activator moeAp 866568 866574 -177.0 aatgactgctTTGCCCATagtattcgtc nd [AIBSCS], [GEA] [1]


RNA cis-regulatory element    
Regulation, transcriptional elongation  
Attenuator type: Transcriptional
Strand: reverse
Evidence: [ICA] Inferred by computational analysis
Reference(s): [4] Merino E, et al., 2005
  Structure type Energy LeftPos RightPos Sequence (RNA-strand)
  terminator -10.4 866409 866449 gcaggacccaGCGCTACGCCCGAGGTGGCATACAGTCTGTGGCGTTTTTCtgacataata
  anti-terminator -4.5 866444 866477 tatagaaagaTGGATATGGCATGTAAAGGCAGGACCCAGCGCTacgcccgagg
  anti-anti-terminator -4.3 866461 866517 aatatcagaaTTTTTATGAATTACTCATTCAATTTTTGAATATAGAAAGATGGATATGGCATGTAAaggcaggacc
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos"





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