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| Operon |  |
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| Name: | fnr |
| This page displays every known transcription unit of this operon and their known regulation. | |
| Name: | fnr | |||||||||
| Synonym(s): | OP00029 | |||||||||
| Gene(s): | fnr Genome Browser M3D Gene expression COLOMBOS | |||||||||
| Note(s): | The expression of the fnr gene was increased in mutants for two genes that encode two terminal oxidases, cyoA and cydB, and in mutant for the transcriptional regulator Fur Kumar R,2011 The expression of fnr is increased under acidic growth conditions in either aerobiosis or microaerobiosis Marzan LW,2013 Based on genome-wide analysis, 472 single-gene knockouts were studied to determine their anaerobic fermentation products, based on the control of redox reactions. It was determined that the combined knockout of the guaB, pyrD, serA, fnr, arcA, and arcB genes enhanced D-lactate overproduction Kim HJ,2013 |
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| Reference(s): |
[1] Shaw DJ., et al., 1982 [2] Shaw DJ., et al., 1982 |
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| Promoter | ||||||||||
| Name: | fnrp | |||||||||
| +1: | 1399552 | |||||||||
| Sigma Factor: | Sigma70 Sigmulon | |||||||||
| Distance from start of the gene: | 26 | |||||||||
| Sequence: |
ctctgctgttaaggtttgcttagacttacttgctccctaaaaagatgttaaaattgacaaAtatcaattacggcttgagca -35 -10 +1 |
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| Evidence: |
[HIPP] [ICWHO] [RS-EPT-CBR] |
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| Reference(s): |
[3] Huerta AM., et al., 2003 [4] Salgado H, et al., 2012 [1] Shaw DJ., et al., 1982 |
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| Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
|---|---|---|---|---|---|---|---|---|---|---|
| LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
| proximal | FNR | repressor | fnrp | 1399546 | 1399559 | -0.5 | gatgttaaaaTTGACAAATATCAAttacggcttg | nd | [GEA], [APIORCISFBSCS], [BCE], [BPP] | [5] |
| Reference(s) |
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|---|---|
[HIPP] Human inference of promoter position