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Name: | cysB | ||||||||||
Synonym(s): | OP00105, cysGB | ||||||||||
Gene(s): | cysB Genome Browser M3D Gene expression COLOMBOS | ||||||||||
Note(s): | cysB expression is inhibited by oleanolic and ursolic acid, which in turn affect the expression of the cysteine regulon and the stress response Grudniak AM,2011 | ||||||||||
Reference(s): |
[1] Bielinska A., et al., 1986 [2] Hryniewicz MM., et al., 1994 |
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Promoter | |||||||||||
Name: | cysBp | ||||||||||
+1: | 1333788 | ||||||||||
Sigma Factor: | Sigma70 Sigmulon | ||||||||||
Distance from start of the gene: | 67 | ||||||||||
Sequence: |
atacactaaggctataaatgatatagtggttatagttagcaccttttttattattaaatcGtattagtcacccgccaggtg -35 -10 +1 |
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Evidence: |
[COMP-AINF] [COMP-HINF-POSITIONAL-IDENTIFICATION] |
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Reference(s): |
[3] Huerta AM., et al., 2003 [4] Ostrowski J., et al., 1987 |
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Terminator(s) | |||||||||||
Type: | rho-independent | ||||||||||
Sequence: | tgcgttatttTCGGCACCTTTTATGTAGCGAAGGTGCCGGaatatattct | ||||||||||
Reference(s): | [4] Ostrowski J., et al., 1987 |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence | Confidence level (C: Confirmed, S: Strong, W: Weak) | Reference(s) | |||
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LeftPos | RightPos | Central Rel-Pos | Sequence | ||||||||
proximal | CysB | repressor | cysBp | 1333751 | 1333797 | -14.0 | ataaatgataTAGTGGTTATAGTTAGCACCTTTTTTATTATTAAATCGTATTAGTCAcccgccaggt | nd | [COMP-HINF-SIMILAR-TO-CONSENSUS] | nd | [6] |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence | Confidence level (C: Confirmed, S: Strong, W: Weak) | Reference(s) | |||
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LeftPos | RightPos | Central Rel-Pos | Sequence | ||||||||
proximal | PhoP-phosphorylated | activator | cysBp | 1333734 | 1333757 | -43.0 | acctatacacTAAGGCTATAAATGATATAGTGGTtatagttagc | nd | [COMP-AINF-SIMILAR-TO-CONSENSUS], [COMP-HINF-SIMILAR-TO-CONSENSUS] | nd | [5] |
RNA cis-regulatory element | ![]() |
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Regulation, transcriptional elongation | |
Attenuator type: | Transcriptional |
Strand: | forward |
Structure type | Energy | LeftPos | RightPos | Sequence (RNA-strand) | |
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terminator | -19.4 | 1333674 | 1333703 | tttataaacaAAGGGTCGCGAAAGCGGCCCTTTTTTATTgcatattatt |
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos" |
Reference(s) |
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