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Name: | malT | ||||||||||
Synonym(s): | OP00128 | ||||||||||
Gene(s): | malT Genome Browser M3D Gene expression COLOMBOS | ||||||||||
Note(s): | The translation of the malT mRNA is positively controlled by H-NS and StpA regulators Johansson J, Dagberg B, Richet E, Uhlin BE,1998. Park HS, Ostberg Y, Johansson J, Wagner EG, Uhlin BE,2010 |
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Evidence: | [EXP-IDA-BOUNDARIES-DEFINED] Boundaries of transcription experimentally identified | ||||||||||
Reference(s): |
[1] Cole ST., et al., 1986 [2] Kornacker MG., et al., 1989 |
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Promoter | |||||||||||
Name: | malTp | ||||||||||
+1: | 3553024 | ||||||||||
Sigma Factor: | Sigma70 Sigmulon | ||||||||||
Distance from start of the gene: | 61 | ||||||||||
Sequence: |
cagacacataaaaaaacgtcatcgcttgcattagaaaggtttctggccgaccttataaccAttaattacgaagcgcaaaaa -35 -10 +1 |
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Evidence: |
[COMP-AINF] [EXP-IDA-TRANSCRIPTION-INIT-MAPPING] [RS-EPT-CBR] |
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Reference(s): |
[3] Chapon C. 1982 [4] Chapon C., et al., 1983 [5] Dethiollaz S., et al., 1996 [6] Huerta AM., et al., 2003 [7] Salgado H, et al., 2012 |
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Terminator(s) | |||||||||||
Type: | rho-independent | ||||||||||
Sequence: | gtgtaagtttAGCCGGATAACGCGCCAGATCCGGCTtacatctctg | ||||||||||
Reference(s): | [1] Cole ST., et al., 1986 |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence | Confidence level (C: Confirmed, S: Strong, W: Weak) | Reference(s) | |||
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LeftPos | RightPos | Central Rel-Pos | Sequence | ||||||||
proximal | CRP-cyclic-AMP | activator | malTp | 3552943 | 3552964 | -70.5 | aaagatttggAATTGTGACACAGTGCAAATTCagacacataa | nd | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [4], [8], [9], [10], [11] |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence | Confidence level (C: Confirmed, S: Strong, W: Weak) | Reference(s) | |||
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LeftPos | RightPos | Central Rel-Pos | Sequence | ||||||||
nd | Lrp | activator | malTp | nd | nd | nd | nd | nd | [EXP-IEP-GENE-EXPRESSION-ANALYSIS] | W | [12] |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence | Confidence level (C: Confirmed, S: Strong, W: Weak) | Reference(s) | |||
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LeftPos | RightPos | Central Rel-Pos | Sequence | ||||||||
proximal | Mlc | repressor | malTp | 3553024 | 3553046 | 12.0 | ccttataaccATTAATTACGAAGCGCAAAAAAAataatatttc | nd | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS] | S | [8] |
Reference(s) |
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