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Name: | narXL | ||||||||||
Synonym(s): | OP00213, narL | ||||||||||
Gene(s): | narL, narX Genome Browser M3D Gene expression COLOMBOS | ||||||||||
Reference(s): |
[1] Darwin AJ., et al., 1995 [2] Stewart V., et al., 1988 |
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Promoter | |||||||||||
Name: | narXp | ||||||||||
+1: | 1277777 | ||||||||||
Sigma Factor: | Sigma70 Sigmulon | ||||||||||
Distance from start of the gene: | 159 | ||||||||||
Sequence: |
gtgagtacagtgacttcataaaaattatgagatttttcacggtgctgtaaaatccctaccCttaccgatgtaaagcgacta -35 -10 +1 |
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Evidence: |
[COMP-AINF] [COMP-HINF-POSITIONAL-IDENTIFICATION] |
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Reference(s): |
[3] Huerta AM., et al., 2003 [4] Nohno T., et al., 1989 |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence | Confidence level (C: Confirmed, S: Strong, W: Weak) | Reference(s) | |||
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LeftPos | RightPos | Central Rel-Pos | Sequence | ||||||||
remote | FNR | repressor | narXp | 1277664 | 1277677 | 107.5 | ccattccagaATGTATCGTCACATtcattaaggt | nd | [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS] | nd | [6] |
proximal | FNR | repressor | narXp | 1277845 | 1277858 | -75.0 | tatctatcatTGATATTTATCATTacccatagtg | nd | [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | nd | [6] |
remote | FNR | repressor | narXp | 1277877 | 1277890 | -106.5 | aatttgatgtAAATCAAACGATAAgataacttta | nd | [COMP-AINF-PATTERN-DISCOVERY], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-CHIP-CHIP], [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS] | nd | [4], [6] |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence | Confidence level (C: Confirmed, S: Strong, W: Weak) | Reference(s) | |||
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LeftPos | RightPos | Central Rel-Pos | Sequence | ||||||||
remote | ModE-molybdate | activator | narXp | 1277907 | 1277930 | -141.5 | cgtttcgatgTCTGCCACCTTAGTGTCTGTAGCTaaaggcaatt | nd | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [5] |
Reference(s) |
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