RegulonDB RegulonDB 11.1: Operon Form

rimL operon and associated TUs in Escherichia coli K-12 genome

Name: rimL
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit       
Name: rimL
Gene(s): rimL   Genome Browser M3D Gene expression COLOMBOS
Evidence: [EXP-IDA-BOUNDARIES-DEFINED] Boundaries of transcription experimentally identified
Reference(s): [1] Tanaka S., et al., 1989
Name: rimLp
+1: 1498743
Distance from start of the gene: 195
Reference(s): [1] Tanaka S., et al., 1989

RNA cis-regulatory element    
Regulation, transcriptional elongation  
Attenuator type: Transcriptional
Strand: forward
  Structure type Energy LeftPos RightPos Sequence (RNA-strand)
  terminator -13.3 1498885 1498909 actttcctaaGCCGCCAGCCAGGCGGCTTTTTTAacaactgcat
  anti-terminator -10.3 1498846 1498893 ctcaaaatccTGCAGCAGGAGAGCGTCAAAGAGGTGTAAACTTTCCTAAGCCGCCAGccaggcggct
  anti-anti-terminator -13.2 1498833 1498863 aaaagatgagATGCTCAAAATCCTGCAGCAGGAGAGCGTCaaagaggtgt
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos"