RegulonDB RegulonDB 10.9: Operon Form

adk operon and associated TUs in Escherichia coli K-12 genome

Name: adk
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit       
Name: adk
Gene(s): adk   Genome Browser M3D Gene expression COLOMBOS
Evidence: [ICWHO] Inferred computationally without human oversight
Name: adkp
+1: 497139
Distance from start of the gene: 36
Sequence: ttcagccccaggtgcctttcttgaggcaatcgcctgttggtggtatcgtttatcgcttttTcaaaaaattcgacacatttt
Evidence: [HIPP]
Reference(s): [1] Brune M., et al., 1985

RNA cis-regulatory element    
Regulation, transcriptional elongation  
Attenuator type: Transcriptional
Strand: forward
Evidence: [ICA] Inferred by computational analysis
Reference(s): [2] Merino E, et al., 2005
  Structure type Energy LeftPos RightPos Sequence (RNA-strand)
  terminator -21.6 496998 497037 tcctgatgtaATGCCGGATGACCTTCGTGTCATCCGGCATTTTTCTTTTcatcatctgc
  anti-terminator -4.4 496985 497011 ccagctgctgGTTTCCTGATGTAATGCCGGATGACCttcgtgtcat
  anti-anti-terminator -9.1 496965 496996 ctgtttattcGTCGTATGAACCAGCTGCTGGTTTCCTGATGtaatgccgga
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos"