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Name: | sohB | |||||||||
Gene(s): | sohB Genome Browser M3D Gene expression COLOMBOS | |||||||||
Reference(s): | [1] Talukder AA., et al., 1996 | |||||||||
Promoter | ||||||||||
Name: | sohBp1 | |||||||||
+1: | 1329284 | |||||||||
Sigma Factor: | Sigma70 Sigmulon | |||||||||
Distance from start of the gene: | 48 | |||||||||
Sequence: |
aaatggatactttgtcatactttcgctgcaataacatctctgcgagacggcttaacatgcCtgttgtaaactgtgagccaa -35 -10 +1 |
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Evidence: |
[APIORCISFBSCS] [HIPP] [ICWHO] |
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Reference(s): |
[2] Huerta AM., et al., 2003 [1] Talukder AA., et al., 1996 |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
proximal | CRP-cyclic-AMP | repressor | sohBp1 | 1329292 | 1329313 | 19.5 | gcctgttgtaAACTGTGAGCCAAAGCGTTGTTtaaccaaggt | nd | [AIBSCS] | nd |
Name: | sohB | |||||||||
Gene(s): | sohB Genome Browser M3D Gene expression COLOMBOS | |||||||||
Reference(s): | [1] Talukder AA., et al., 1996 | |||||||||
Promoter | ||||||||||
Name: | sohBp | |||||||||
+1: | 1329284 | |||||||||
Sigma Factor: | Sigma38 Sigmulon | |||||||||
Distance from start of the gene: | 48 | |||||||||
Sequence: |
aaatggatactttgtcatactttcgctgcaataacatctctgcgagacggcttaacatgcCtgttgtaaactgtgagccaa -35 -10 +1 |
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Evidence: |
[APIORCISFBSCS] [HIPP] [ICWHO] |
|||||||||
Reference(s): |
[2] Huerta AM., et al., 2003 [1] Talukder AA., et al., 1996 |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
proximal | CRP-cyclic-AMP | repressor | sohBp | 1329292 | 1329313 | 19.5 | gcctgttgtaAACTGTGAGCCAAAGCGTTGTTtaaccaaggt | nd | [AIBSCS] | nd |
Name: | sohB | |||||||||
Gene(s): | sohB Genome Browser M3D Gene expression COLOMBOS | |||||||||
Reference(s): | [1] Talukder AA., et al., 1996 | |||||||||
Promoter | ||||||||||
Name: | sohBp2 | |||||||||
+1: | 1329301 | |||||||||
Sigma Factor: | Sigma70 Sigmulon | |||||||||
Distance from start of the gene: | 31 | |||||||||
Sequence: |
tactttcgctgcaataacatctctgcgagacggcttaacatgcctgttgtaaactgtgagCcaaagcgttgtttaaccaag -35 -10 +1 |
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Evidence: |
[HIPP] [ICWHO] [RS-EPT-CBR] |
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Reference(s): |
[2] Huerta AM., et al., 2003 [3] Salgado H, et al., 2012 [1] Talukder AA., et al., 1996 |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
proximal | CRP-cyclic-AMP | repressor | sohBp2 | 1329291 | 1329312 | 2.0 | tgcctgttgtAAACTGTGAGCCAAAGCGTTGTttaaccaagg | nd | [AIBSCS] | nd |
Reference(s) |
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