Name: |
yhdWXYZ |
Gene(s): |
yhdW, yhdX, yhdY, yhdZ
Genome Browser
M3D Gene expression
COLOMBOS
|
Reference(s): |
[1] Zimmer DP., et al., 2000
|
Promoter |
|
Name: |
yhdWp |
+1: |
3418972 |
Sigma Factor: |
Sigma54 Sigmulon |
Distance from start of the gene: |
70
|
Sequence: |
cagcttattgcgacgcgaaatcgtgcgcaaaagctggcactacttttgcttataagaggaTggccacagacaggtaaaaga
|
Note(s): |
We assigned a putative transcription start site to this promoter based on the observation that the majority of the σ54-dependent promoters, whose transcription start sites were determined experimentally, present a distance of 11 nucleotides between the transcription start site and the -12 box Barrios H,1999. |
Evidence: |
[AIBSCS] [AIPP]
|
Reference(s): |
[2] Reitzer L., et al., 2001
|
Transcription factor |
Function |
Promoter |
Binding Sites |
Evidence (Confirmed, Strong, Weak) |
Reference(s) |
LeftPos |
RightPos |
Central Rel-Pos |
Sequence |
NtrC-phosphorylated |
activator |
yhdWp |
3418838
|
3418854
|
-126.0
|
gtaaatatttTGCGCCAAAATGTGGCGcatgtttcat
|
[GEA]
|
[1]
|
NtrC-phosphorylated |
activator |
yhdWp |
3418868
|
3418884
|
-96.0
|
gtttcattttCGCACCATTGCGGGGCGctgtttttat
|
[GEA]
|
[1]
|