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Name: | metBL | |||||||||
Gene(s): | metB, metL Genome Browser M3D Gene expression COLOMBOS | |||||||||
Evidence: | [PM] Polar mutation | |||||||||
Reference(s): | [1] Greene RC., et al., 1984 | |||||||||
Promoter | ||||||||||
Name: | metBp | |||||||||
+1: | 4128636 | |||||||||
Sigma Factor: | Sigma70 Sigmulon | |||||||||
Distance from start of the gene: | 36 | |||||||||
Sequence: |
aagaagtttagatgtccagatgtattgacgtccattaacacaatgtttactctggtgcctGacatttcaccgacaaagccc -35 -10 +1 |
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Evidence: |
[ICWHO] [TIM] |
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Reference(s): |
[2] Huerta AM., et al., 2003 [3] Kirby TW., et al., 1986 |
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Terminator(s) | ||||||||||
Type: | rho-independent | |||||||||
Sequence: | agtacatggtTAGTTTATATTTGCAGTCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCatcctgaagt | |||||||||
Reference(s): |
[4] Feng CQ., et al., 2019 [5] Lesnik EA., et al., 2001 |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
proximal | MetJ-S-adenosyl-L-methionine | repressor | metBp | 4128572 | 4128587 | -56.5 | tcaatctataCGCAAAGAAGTTTAGAtgtccagatg | nd | [GEA], [AIBSCS] | [3], [6], [7] |
proximal | MetJ-S-adenosyl-L-methionine | repressor | metBp | 4128580 | 4128595 | -48.5 | tacgcaaagaAGTTTAGATGTCCAGAtgtattgacg | nd | [GEA], [AIBSCS] | [3], [6], [7] |
proximal | MetJ-S-adenosyl-L-methionine | repressor | metBp | 4128582 | 4128597 | -46.5 | cgcaaagaagTTTAGATGTCCAGATGtattgacgtc | nd | [GEA], [AIBSCS] | [3], [6], [7] |
proximal | MetJ-S-adenosyl-L-methionine | repressor | metBp | 4128588 | 4128603 | -40.5 | gaagtttagaTGTCCAGATGTATTGAcgtccattaa | nd | [GEA], [AIBSCS] | [3], [6], [7] |
proximal | MetJ-S-adenosyl-L-methionine | repressor | metBp | 4128590 | 4128605 | -38.5 | agtttagatgTCCAGATGTATTGACGtccattaaca | nd | [GEA], [AIBSCS] | [3], [6], [7] |
proximal | MetJ-S-adenosyl-L-methionine | repressor | metBp | 4128598 | 4128613 | -30.5 | tgtccagatgTATTGACGTCCATTAAcacaatgttt | nd | [GEA], [AIBSCS] | [3], [6], [7] |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
proximal | PhoP-phosphorylated | activator | metBp | 4128608 | 4128624 | -20.0 | tattgacgtcCATTAACACAATGTTTActctggtgcc | nd | [GEA], [AIBSCS] | [8] |
Reference(s) |
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