RegulonDB RegulonDB 10.10: Operon Form
   

gntP operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: gntP
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit          
Name: gntP
Gene(s): gntP   Genome Browser M3D Gene expression COLOMBOS
Evidence: [LTED] Length of transcript experimentally determined
Reference(s): [1] Klemm P., et al., 1996
Promoter
Name: gntPp
+1: 4551334
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 38
Sequence: tgatcagaggatgtgacattcatcgcaacaatggttgaccaatttacataacatatcgccCaaaataacaacggttcaacc
                      -35                        -10        +1                   
Evidence: [ICWHO]
[TIM]
Reference(s): [2] Huerta AM., et al., 2003
[1] Klemm P., et al., 1996
Terminator(s)
Type: rho-independent
Sequence: tcatcagtctGAGCCTGCCATTGGCAGGCTCtggtgtcctt
Reference(s): [1] Klemm P., et al., 1996
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal CRP-cyclic-AMP activator gntPp 4551344 4551365 -20.5 tcatcgcaacAATGGTTGACCAATTTACATAAcatatcgccc nd [GEA], [AIBSCS] [7]
proximal CRP-cyclic-AMP activator gntPp 4551365 4551386 -41.5 attgatcagaGGATGTGACATTCATCGCAACAatggttgacc nd [GEA], [AIBSCS] [6], [7]
remote CRP-cyclic-AMP activator gntPp 4551450 4551471 -126.5 gaattctgaaATTGGTTAACCACATCACAAGAatttcactct nd [APIORCISFBSCS], [BPP] nd
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
remote OxyR repressor gntPp 4551456 4551472 -130.0 cgaattctgaAATTGGTTAACCACATCacaagaattt nd [GEA], [APIORCISFBSCS] [3]
remote OxyR repressor gntPp 4551478 4551494 -152.0 cttttggtaaGACATGTCAACCCGAATtctgaaattg nd [GEA], [APIORCISFBSCS] [3]
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal UxuR repressor gntPp 4551350 4551367 -24.5 attcatcgcaACAATGGTTGACCAATTTacataacata nd [GEA], [APIORCISFBSCS], [BPP], [SM] [6]
remote UxuR repressor gntPp 4551456 4551473 -130.5 ccgaattctgAAATTGGTTAACCACATCacaagaattt nd [GEA], [APIORCISFBSCS] [4], [5]





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