RegulonDB RegulonDB 10.9: Operon Form
   

ulaABCDEF operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: ulaABCDEF
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit          
Name: ulaABCDEF
Gene(s): ulaA, ulaB, ulaC, ulaD, ulaE, ulaF   Genome Browser M3D Gene expression COLOMBOS
Evidence: [BTEI] Boundaries of transcription experimentally identified
[ITCR] Inferred through co-regulation
Reference(s): [1] Campos E., et al., 2002
[2] Yew WS., et al., 2002
Promoter
Name: ulaAp
+1: 4419927
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 53
Sequence: gcgtcacatttaatcataaataatcttgttgtgattacttttgaaaattagagtgagtgcAcaacattccgggtgtgtgga
                          -35                    -10        +1                   
Evidence: [ICWHO]
[TIM]
Reference(s): [3] Campos E., et al., 2004
[4] Huerta AM., et al., 2003
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal CRP-cAMP activator ulaAp 4419856 4419877 -60.5 atgtggaattATTTGCGGGTCGCGTCACATTTAatcataaata nd [BCE], [GEA], [SM] [3], [5]
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
nd IHF repressor ulaAp nd nd nd nd nd [BPP], [GEA], [IGI] [3]
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal UlaR repressor ulaAp 4419873 4419892 -44.5 ggtcgcgtcaCATTTAATCATAAATAATCTTgttgtgatta nd [BPP], [GEA], [GS], [SM] [1], [3], [5], [6]
proximal UlaR repressor ulaAp 4419898 4419917 -19.5 aatcttgttgTGATTACTTTTGAAAATTAGAgtgagtgcac nd [BPP], [GEA], [GS] [1], [3], [5], [6]





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