RegulonDB RegulonDB 10.10: Operon Form
   

emrKY operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: emrKY
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit          
Name: emrKY
Gene(s): emrY, emrK   Genome Browser M3D Gene expression COLOMBOS
Note(s): emrK expression is increased at least 5-fold by indole Hirakawa H,2005.
Based on microarray and RT-qPCR analyses, it was determined that the emrK gene is upregulated upon exposure to glutathione (GSH) Goswami M,2018
Evidence: [ITCR] Inferred through co-regulation
Reference(s): [1] Salmon K., et al., 2003
Promoter
Name: emrKp
+1: 2483448
Distance from start of the gene: 109
Sequence: attgcaaaagccacggtttagtcctctgttgttttttttgcacctcatttaaattaggccTccaacgttcctgggataatg
Evidence: [TIM]
Reference(s): [2] Eguchi Y., et al., 2003
[3] Kato A., et al., 2000
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal EvgA-phosphorylated activator emrKp 2483513 2483530 -73.5 cttcttactaATCCTACAGGCGTAAGAAttgtattgca nd [GEA], [AIBSCS], [APIORCISFBSCS], [BPP] [2], [3], [4], [5]
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
nd FNR activator emrKp nd nd nd nd nd [GEA], [BPP] [1]





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