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| Operon |  |
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| Name: | emrKY |
| This page displays every known transcription unit of this operon and their known regulation. | |
| Name: | emrKY | |||||||||
| Gene(s): | emrY, emrK Genome Browser M3D Gene expression COLOMBOS | |||||||||
| Note(s): | emrK expression is increased at least 5-fold by indole Hirakawa H,2005. Based on microarray and RT-qPCR analyses, it was determined that the emrK gene is upregulated upon exposure to glutathione (GSH) Goswami M,2018 |
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| Evidence: | [ITCR] Inferred through co-regulation | |||||||||
| Reference(s): | [1] Salmon K., et al., 2003 | |||||||||
| Promoter | ||||||||||
| Name: | emrKp | |||||||||
| +1: | 2483448 | |||||||||
| Distance from start of the gene: | 109 | |||||||||
| Sequence: |
attgcaaaagccacggtttagtcctctgttgttttttttgcacctcatttaaattaggccTccaacgttcctgggataatg |
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| Evidence: | [TIM] | |||||||||
| Reference(s): |
[2] Eguchi Y., et al., 2003 [3] Kato A., et al., 2000 |
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| Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
|---|---|---|---|---|---|---|---|---|---|---|
| LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
| proximal | EvgA-Phosphorylated | activator | emrKp | 2483513 | 2483530 | -73.5 | tcttcttactAATCCTACAGGCGTAAGAAttgtattgca | nd | [AIBSCS], [APIORCISFBSCS], [BPP], [GEA] | [2], [3] |
| Note(s): | 1By making use of microarray analyses it was concluded that anarobiosis does not affect the expression of the purMN operon, although FNR appears to activate it. A putative FNR-binding site, which is not shown in the paper, was identified upstream of this operon Salmon K,2003.2By making use of microarray analyses it was concluded that anarobiosis does not affect the expression of the purMN operon, although FNR appears to activate it. A putative FNR-binding site, which is not shown in the paper, was identified upstream of this operon Salmon K,2003. |
| Reference(s) |
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|---|---|
[TIM] Transcription initiation mapping