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Name: | ytfE | |||||||||
Gene(s): | ytfE Genome Browser M3D Gene expression COLOMBOS | |||||||||
Evidence: | [BTEI] Boundaries of transcription experimentally identified [IC] Inferred by curator |
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Promoter | ||||||||||
Name: | ytfEp | |||||||||
+1: | 4432009 | |||||||||
Distance from start of the gene: | 26 | |||||||||
Sequence: |
aagcctctgctacgtaagggttatagcttttgccttaaagatgcatttaaaatacatcttAtcttattaagaatgaggtat |
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Evidence: | [TIM] | |||||||||
Reference(s): | [1] Bodenmiller DM., et al., 2006 |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
proximal | NarL-phosphorylated | activator | ytfEp | 4432047 | 4432053 | -41.0 | ctgctacgtaAGGGTTAtagcttttgc | nd | [AIBSCS] | [2] |
proximal | NarL-phosphorylated | activator | ytfEp | 4432056 | 4432062 | -50.0 | aataagcctcTGCTACGtaagggttat | nd | [AIBSCS] | [2] |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
proximal | NarP-phosphorylated | activator | ytfEp | 4432042 | 4432057 | -41.0 | gcctctgctaCGTAAGGGTTATAGCTtttgccttaa | nd | [AIBSCS] | [2] |
proximal | NarP-phosphorylated | activator | ytfEp | 4432051 | 4432066 | -50.0 | gttaaataagCCTCTGCTACGTAAGGgttatagctt | nd | [AIBSCS] | [2] |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
proximal | NsrR | repressor | ytfEp | 4432012 | 4432030 | -12.0 | ttgccttaaaGATGCATTTAAAATACATCttatcttatt | nd | [GEA], [AIBSCS], [APIORCISFBSCS], [SM] | [1], [3], [4] |
Reference(s) |
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