RegulonDB RegulonDB 10.10: Operon Form

ybhD operon and associated TUs in Escherichia coli K-12 genome

Name: ybhD
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit       
Name: ybhD
Gene(s): ybhD   Genome Browser M3D Gene expression COLOMBOS
Evidence: [AISGDTU] Automated inference that a single-gene directon is a transcription unit

RNA cis-regulatory element    
Regulation, transcriptional elongation  
Attenuator type: Transcriptional
Strand: reverse
  Structure type Energy LeftPos RightPos Sequence (RNA-strand)
  terminator -9.7 800761 800804 aggaacgcgcCCCTCGAGGTTCCACCTCGCATCATCACGCAGGGTATTTTTTTcataataatg
  anti-terminator -15.4 800793 800840 cgctgcgtttGATCTTCGGGTAAATGTTCCGCTAACAGGAACGCGCCCCTCGAGGTTccacctcgca
  anti-anti-terminator -11.5 800819 800851 atattttatcGCGCTGCGTTTGATCTTCGGGTAAATGTTCCGctaacaggaa
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos"