RegulonDB RegulonDB 11.1: Operon Form
   

ybhQ operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: ybhQ
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit       
Name: ybhQ
Gene(s): ybhQ   Genome Browser M3D Gene expression COLOMBOS
Evidence: [COMP-AINF-SINGLE-DIRECTON] Automated inference that a single-gene directon is a transcription unit
Promoter
Name: ybhQp
+1: 824601
Distance from start of the gene: 29
Sequence: cggcgtcacaaaaaggtgcggtcttacggaattttccgtaaagttcggtactctgagtaaGtagagataaattcttcagga
Note(s): This promoter appears to be induced in two phases after σE induction. It is induced during the first 5 minutes following σE induction, decreased from 5 to 10 minutes, induced from 10 to 15 minutes, and decreased from 15 to 20 minutes Lacoux C,2020.
Evidence: [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP]
Reference(s): [1] Mendoza-Vargas A., et al., 2009


Evidence    

 [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP] High-throughput transcription initiation mapping


Reference(s)    

 [1] Mendoza-Vargas A., Olvera L., Olvera M., Grande R., Vega-Alvarado L., Taboada B., Jimenez-Jacinto V., Salgado H., Juarez K., Contreras-Moreira B., Huerta AM., Collado-Vides J., Morett E., 2009, Genome-wide identification of transcription start sites, promoters and transcription factor binding sites in E. coli., PLoS One 4(10):e7526

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