RegulonDB RegulonDB 11.0: Operon Form

argA operon and associated TUs in Escherichia coli K-12 genome

Name: argA
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit          
Name: argA
Gene(s): argA   Genome Browser M3D Gene expression COLOMBOS
Note(s): argA gene expression is downregulated upon L-valine addition (isoleucine starvation) in the cellular growth medium Gummesson B, Shah SA, Borum AS, Fessler M, Mitarai N, Sørensen MA, Svenningsen SL,2020.
Evidence: [AISGDTU] Automated inference that a single-gene directon is a transcription unit
Name: argAp
+1: 2949156
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 86
Sequence: gtcatctaataaacggtaaacattctttttatattcacggcattactgataaaaaagtcgCtctcgcataaaatttacact
                            -35                   -10       +1                   
Evidence: [AIPP]
Reference(s): [1] Huerta AM., et al., 2003
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
remote ArgR-L-arginine repressor argAp 2949193 2949211 46.5 ctgcgaaaaaACAGAATAAAAATACACTAatttcgaata nd [GEA], [AIBSCS], [APIORCISFBSCS], [BPP] [2], [3]
remote ArgR-L-arginine repressor argAp 2949214 2949231 67.5 atacactaatTTCGAATAATCATGCAAAgaggtgtgcc nd [EME], [GEA], [AIBSCS], [AIBSPD], [APIORCISFBSCS], [BPP], [CEE] [2], [3]