Name: |
oxyS |
Gene(s): |
oxyS
Genome Browser
M3D Gene expression
COLOMBOS
|
Note(s): |
The transcription of the gene oxyS is enhanced under high oxygen saturation (300%) Baez A,2013 |
Evidence: |
[AISGDTU] Automated inference that a single-gene directon is a transcription unit |
Promoter |
|
Name: |
oxySp |
+1: |
4158394 |
Sigma Factor: |
Sigma70 Sigmulon |
Distance from start of the gene: |
0
|
Sequence: |
taggtagaatagcaatgaacgattatccctatcaagcattctgactgataattgctcacaGaaacggagcggcacctcttt -35 -10 +1
|
Evidence: |
[HIPP] [ICWHO]
|
Reference(s): |
[1] Huerta AM., et al., 2003 [2] Toledano MB., et al., 1994
|
Type |
Transcription factor |
Function |
Promoter |
Binding Sites |
Growth Conditions |
Evidence (Confirmed, Strong, Weak) |
Reference(s) |
LeftPos |
RightPos |
Central Rel-Pos |
Sequence |
proximal |
OxyR
|
activator |
oxySp |
4158431
|
4158447
|
-45.0
|
cgataggtagAATAGCAATGAACGATTatccctatca |
|
[GEA], [APIORCISFBSCS], [BPP]
|
[2], [3]
|
proximal |
OxyR
|
activator |
oxySp |
4158453
|
4158469
|
-67.0
|
ccatcgccacGATAGTTCATGGCGATAggtagaatag |
|
[GEA], [RSE], [APIORCISFBSCS], [BPP], [CEEUMA], [IHBCE]
|
[2], [3], [4]
|
Transcription factor |
Function |
Promoter |
Binding Sites |
Evidence (Confirmed, Strong, Weak) |
Reference(s) |
LeftPos |
RightPos |
Central Rel-Pos |
Sequence |
OxyR |
activator |
oxySp |
4158453
|
4158469
|
-67.0
|
ccatcgccacGATAGTTCATGGCGATAggtagaatag
|
[GEA], [RSE]
|
[2], [3], [4]
|
OxyR |
activator |
oxySp |
4158431
|
4158447
|
-45.0
|
cgataggtagAATAGCAATGAACGATTatccctatca
|
[GEA]
|
[2], [3]
|