RegulonDB RegulonDB 10.8: Operon Form
   

pepT operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: pepT
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit          
Name: pepT
Gene(s): pepT   Genome Browser M3D Gene expression COLOMBOS
Evidence: [AISDTU] Automated inference that a single-gene directon is a transcription unit
Promoter
Name: pepTp
+1: 1185823
Distance from start of the gene: 21
Sequence: gcaggggtaaaagtgacctgacgcaatatttgtcttttcttgcttcttaataatgttgtcAcaaaaagtgagggtgactac
Evidence: [CV(RS-EPT-CBR/TA)]
[HTIM]
[RS-EPT-CBR]
Reference(s): [1] Mendoza-Vargas A., et al., 2009
[2] Salgado H, et al., 2012
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
nd FNR1 activator pepTp nd nd nd nd nd [AIBSCS], [CV(GEA/ROMA)], [GEA] [3]
Note(s): 1By making use of microarray analyses, Constantinidou et al. Constantinidou C,2006 concluded that FNR activates pepT gene expression. They also identified a putative FNR-binding site upstream of the pepT gene, but the sequence was not shown.1By making use of microarray analyses, Constantinidou et al. Constantinidou C,2006 concluded that FNR activates pepT gene expression. They also identified a putative FNR-binding site upstream of the pepT gene, but the sequence was not shown.





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