RegulonDB RegulonDB 11.1: Operon Form
   

purT operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: purT
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit          
Name: purT
Gene(s): purT   Genome Browser M3D Gene expression COLOMBOS
Note(s): Based on a combination of genetic, functional, and biochemical analyses, regulatory elements were identified in the regulatory region of purT Belliveau NM,2018
Evidence: [COMP-AINF-SINGLE-DIRECTON] Automated inference that a single-gene directon is a transcription unit
Promoter
Name: purTp
+1: 1930857
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 24
Sequence: gttgagaaatcaacatcagcaataaagacacacgcaaacgttttcgtttatactgcgcgcGgaattaatcaggggatattc
                         -35                     -10        +1                   
Evidence: [COMP-AINF]
[COMP-AINF-PATTERN-DISCOVERY]
[EXP-IMP]
[IC]
Reference(s): [1] Belliveau NM., et al., 2018
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence Confidence level (C: Confirmed, S: Strong, W: Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal PurR-hypoxanthine repressor purTp 1930828 1930844 -21.5 ataaagacacACGCAAACGTTTTCGTTtatactgcgc nd [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS], [EXP-IMP-SITE-MUTATION] C [1]





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