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Name: | purT | ||||||||||
Gene(s): | purT Genome Browser M3D Gene expression COLOMBOS | ||||||||||
Note(s): | Based on a combination of genetic, functional, and biochemical analyses, regulatory elements were identified in the regulatory region of purT Belliveau NM,2018 | ||||||||||
Evidence: | [COMP-AINF-SINGLE-DIRECTON] Automated inference that a single-gene directon is a transcription unit | ||||||||||
Promoter | |||||||||||
Name: | purTp | ||||||||||
+1: | 1930857 | ||||||||||
Sigma Factor: | Sigma70 Sigmulon | ||||||||||
Distance from start of the gene: | 24 | ||||||||||
Sequence: |
gttgagaaatcaacatcagcaataaagacacacgcaaacgttttcgtttatactgcgcgcGgaattaatcaggggatattc -35 -10 +1 |
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Evidence: |
[COMP-AINF] [COMP-AINF-PATTERN-DISCOVERY] [EXP-IMP] [IC] |
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Reference(s): | [1] Belliveau NM., et al., 2018 |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence | Confidence level (C: Confirmed, S: Strong, W: Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | ||||||||
proximal | PurR-hypoxanthine | repressor | purTp | 1930828 | 1930844 | -21.5 | ataaagacacACGCAAACGTTTTCGTTtatactgcgc | nd | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS], [EXP-IMP-SITE-MUTATION] | C | [1] |