RegulonDB RegulonDB 10.10: Operon Form

ryeA operon and associated TUs in Escherichia coli K-12 genome

Name: ryeA
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit       
Name: ryeA
Gene(s): ryeA   Genome Browser M3D Gene expression COLOMBOS
Evidence: [AISGDTU] Automated inference that a single-gene directon is a transcription unit
[LTED] Length of transcript experimentally determined
Reference(s): [1] Argaman L., et al., 2001
Name: ryeAp
+1: 1923064
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 2
Sequence: cttaacaagaatgttaaaaaacgctggactcagacagtagagtgtgtgttatggttgactAtaaagtcagcgaaggaaatg
                         -35                      -10       +1                   
Note(s): Vogel et al. Vogel J,2003 mapped a transcriptional start site of this promoter 2 nt downstream of the one mapped by J. Choi et al., but it appears to be the product of a proccesed RNA Choi JS,2019.
Evidence: [HIPP]
Reference(s): [1] Argaman L., et al., 2001
[2] Choi JS., et al., 2019