RegulonDB RegulonDB 10.10: Operon Form

uspG operon and associated TUs in Escherichia coli K-12 genome

Name: uspG
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit       
Name: uspG
Gene(s): uspG   Genome Browser M3D Gene expression COLOMBOS
Note(s): The uspG gene is upregulated by long-term (8 to 12 h) exposure of E. coli to some biocides Merchel Piovesan Pereira B, Wang X, Tagkopoulos I,2020.
Evidence: [AISGDTU] Automated inference that a single-gene directon is a transcription unit
Name: uspGp
+1: 641903
Distance from start of the gene: 36
Sequence: aaacagttcgtaaggaaaaagaaccagacaaatatcagggataaatattataatcatggcGaatgatttgttcatgattaa
Evidence: [HTTIM]    
Reference(s): [1] Mendoza-Vargas A., et al., 2009
[2] Salgado H, et al., 2012

RNA cis-regulatory element    
Regulation, transcriptional elongation  
Attenuator type: Translational
Strand: reverse
Evidence: [ICA] Inferred by computational analysis
Reference(s): [3] Merino E, et al., 2005
  Structure type Energy LeftPos RightPos Sequence (RNA-strand)
  terminator -8.1 641884 641913 ataaatattaTAATCATGGCGAATGATTTGTTCATGATTaacagggaga
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos"