RegulonDB RegulonDB 10.9: Operon Form
   

cspH operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: cspH
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit       
Name: cspH
Gene(s): cspH   Genome Browser M3D Gene expression COLOMBOS
Evidence: [AISGDTU] Automated inference that a single-gene directon is a transcription unit


RNA cis-regulatory element    
Regulation, transcriptional elongation  
Attenuator type: Transcriptional
Strand: reverse
Evidence: [ICA] Inferred by computational analysis
Reference(s): [1] Merino E, et al., 2005
  Structure type Energy LeftPos RightPos Sequence (RNA-strand)
  terminator -9.6 1051219 1051253 ttttagccgtCCGGCGGTCTTAAATATCGCTGGCTTTATTTTATtaaccccgta
  anti-terminator -5.32 1051242 1051282 gcatgataatTGAGATTAAGCAAATTTTATTTTAGCCGTCCGGCGGTCTTaaatatcgct
  anti-anti-terminator -6.2 1051253 1051307 ctttcaaaccGACGCAGCTATTAACGCATGATAATTGAGATTAAGCAAATTTTATTTTAGCCGTccggcggtct
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos"



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