RegulonDB RegulonDB 10.8: Operon Form
   

fadE operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: fadE
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit          
Name: fadE
Gene(s): fadE   Genome Browser M3D Gene expression COLOMBOS
Note(s): The fadE gene expression is enhanced when the fadD gene, which encodes the acyl-CoA synthetase, is overexpressed. The acyl-CoA probably binds to the FadR transcriptional regulator to inactivate it and avoids its repressive effect on fadE 16734787
Evidence: [AISDTU] Automated inference that a single-gene directon is a transcription unit
Promoter
Name: fadEp
+1: 243406
Distance from start of the gene: 103
Sequence: ggtgctatgaccaggactttttgacctgaagtgcggataaaaacagcaacaatgtgagctTtgttgtaattatattgtaaa
Evidence: [AIPP]
Reference(s): [1] Huerta AM., et al., 2003
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal ArcA-Phosphorylated repressor fadEp 243385 243399 15.0 gctttgttgtAATTATATTGTAAACatattgctaa nd [AIBSCS], [BPP], [CV(CHIP-SV/GEA/ROMA)], [CV(GEA/ROMA)], [GEA] [2]
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
remote FadR repressor fadEp 243325 243341 74.0 atatcatcacAAGTGGTCAGACCTCCTacaagtaagg nd [APIORCISFBSCS], [BPP], [CV(CHIP-SV/GEA/ROMA)], [CV(GEA/ROMA)], [GEA] [3]





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